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. Author manuscript; available in PMC: 2011 Feb 1.
Published in final edited form as: Exp Mol Pathol. 2009 Oct 31;88(1):67. doi: 10.1016/j.yexmp.2009.10.010

Table 1.

Primers and hybridization probes used for Real-Time PCR.

Gene symbol Primers sequence Product (bp)
CDH1 For: 5′-CAATCTCAAGCTCATGGATAACC-3′ 187
Rev: 5′-GAGCAGCAGAATCAGAATTAGC-3′
HIST1H2BD For: 5′-ACTTTGCCAAGGGAGAGACA-3′ 104
Rev: 5′-TTTCAGGCAGATGAGACTTCC-3′
p21 For: 5′-GAAGACCATGTGGTCCTGTCAC -3′ 172
Rev: 5′-AGGGCTTCCTCTTGGAGAAGAT -3′
p53 For: 5′-GTCCCAAGCAATGGATGATT-3′ 104
Rev: 5′-GAGCAGCCTCTGGCATTCT-3′
RGC-32 For: 5′-AGGAACAGCTTCAGCTTCAGT-3′ 152
Rev: 5′-GCTAAAGTTTTGTCAAGATCAGCA-3′
WEE1 For: 5′-TGCTGGTGCTGAACCTCT-3′ 282
Rev: 5′-GCCATCTGTGCTTTCTTGAG-3′
Hyb 1:GCAACTCTGTAAATTCTTGGGAAAGCAC-FL
Hyb 2:LC640-GTGGTATCCGAGGTAATCTACCCTGTCTG-PH
L13 For: 5′-CGTGCGTCTGAAGCCTACA-3′ 227
Rev: 5′-GGAGTCCGTGGGTCTTGAG-3′
β-catenin For: 5′-ACAGGAAGGGATGGAAGGT -3′ 171
Rev: 5′-ACAGTACGCACAAGAGCCTC -3′
18S For: 5′-GTAACCCGTTGAACCCCATT-3′ 151
Rev: 5′-CCATCCAATCGGTAGTAGCG-3′

For, forward primer; Rev, reverse primer; Hyb 1, Hyb 2, hybridization probes; Bp, base pairs; CDH1, Cadherin 1, type 1, E-cadherin; HIST1H2BD, H2B histone family, member B; p53, tumor protein p53; p21, cyclin-dependent kinase inhibitor 1A; RGC-32, response gene to complement 32; WEE1, WEE1 homolog; 18S, 18S ribosomal RNA. RAD51AP1 (RAD51 associated protein 1) expression was assessed using SABiosciences RT qPCR Primers, reference positions 991–1009, catalog number PPH08542A