Table 1.

MSP primers

Gene Name	Forward Primer (5'-3')	Reverse Primer (5'-3')	Product size (bp)	Primer location relative to TSS (bp)	Ref
p16INK4A-U	TTA TTA GAG GGT GGG GTG GAT TGT	CAA CCC CAA ACC ACA ACC ATA A	151	+132 to 283	[22]
p16INK4A-M	TTA TTA GAG GGT GGG GCG GAT CGC	GAC CCC GAA CCG CGA CCG TAA	150	+132 to 282
HOXA9-U	TTG GGG TTA GAT AGG GAG TTG GGA	AAA AAT AAA AAC AAA AAA CAA ACA AA	167	-4453 to -4286	[16]
HOXA9-M	TCG GGG TTA GAT AGG GAG TCG GGA	AAA ATA AAA ACG AAA AAC AAA CGA A	166	-4453 to -4287
CCND2-U	AGA GTA TGT GTT AGG GTT GAT T	ACA TCC TCA CCA ACC CTC CA	108	-1167 to -1059	[12]
CCND2-M	CGG CGA TTT TAT CGT AGT CG	CTC CAC GCT CGA TCC TTC G	101	-1138 to -1037
RASSF1A-U	TTT GGT TGG AGT GTG TTA ATG TG	CAA ACC CCA CAA ACT AAA AAC AA	108	+201 to +309	[23]
RASSF1A-M	GTG TTA ACG CGT TGC GTA TC	AAC CCC GCG AAC TAA AAA CGA	94	+213 to +307
SFRP1-U*	GTT TTG TAG TTT TTG GAG TTA GTG TTG TGT	CTC AAC CTA CAA TCA AAA ACA ACA CAA ACA	135	-2 to +133	[24]
SFRP1-M	TGT AGT TTT CGG AGT TAG TGT CGC GC	CCT ACG ATC GAA AAC GAC GCG AAC G	126	+2 to +128
SFRP1-U**	TTT TAG TAA ATT GAA TTT GTT TGT GA	TAA AAT ACA CAA AAC TGG TAG AAC	149	-151 to -2	[40]
SFRP1-M	TTT AGT AAA TCG AAT TCG AAT TCG TTC GC	TAA AAT ACG CGA AAC TCC TAC G	148	-150 to -2
p57-U	GTT GTT TGT GTT TGT GTA GTT TT	AAA AAT CCC ACA AAC AAC AAA ACA	91	+248 to +339
p57-M	TTG TTC GCG TTT GCG TAG TTT C	AAA TCC CAC GAA CGA CAA AAC G	88	+249 to +337
MGMT-U	TTT GTG TTT TGA TGT TTG TAG GTT TTT GT	AAC TCC ACA CTC TTC CAA AAA CAA AAC A	93	+30 to +123	[25]
MGMT-M	TTT CGA CGT TCG TAG GTT TTC GC	GCA CTC TTC CGA AAA CGA AAC G	81	+36 to +117
THBS1-U	TTG AGT TTG TGT GGT GTA AGA GTA T	CCC CAC TAC CTA ACA CAC AAC T	156	-280 to -124	[26]
THBS1-M	GTT CGC GTG GCG TAA GAG TAC	CGC TAC CTA ACG CGC AAC T	149	-276 to -127

*exon 1

**promoter