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. 2009 Dec 9;48(2):497–502. doi: 10.1128/JCM.00720-09

TABLE 3.

Clinical diagnosis of primary syphilis made in an STI outpatient clinic versus that made by the T. pallidum real-time PCRa

T. pallidum real-time PCR result No. of cases with the following clinical diagnosis at STI clinicb:
+
+ 83 10
31 592
a

The data are for a total of 716 cases. The sensitivity of the T. pallidum real-time PCR was 72.8%, the specificity was 95.5%, the PPV was 89.2%, and the NPV was 95.0%. The kappa value was 0.769, which indicates good agreement between the results of the two tests.

b

The diagnostic criteria for primary syphilis in the STI outpatient clinic setting were dark-field microscopy positive, syphilis serology, and patient history.