Table 1.
SIMU1, TP and FP with the TCDV method
| Effect size | K=50 | K=100 | K=354 | |
|---|---|---|---|---|
| ρd | Mean (SD) | Mean (SD) | Mean (SD) | |
| TP | 0.01 | 30 (15.48) | 30 (15.58) | 27.55 (15.35) |
| 0.02 | 89.65 (10.11) | 89.8 (10.33) | 90.1 (11.12) | |
| 0.03 | 99.8 (0.68) | 99.8 (0.68) | 100 (0) | |
| 0.04 | 100 (0) | 100 (0) | 100 (0) | |
| FP | 0.01 | 4.65 (2.15) | 2.75 (1.58) | 2.1 (1.22) |
| 0.02 | 29.45 (25.86) | 5.6 (2.29) | 2.35 (1.28) | |
| 0.03 | 271.8 (139.59) | 7.1 (2.83) | 2.65 (1.49) | |
| 0.04 | 446.25 (120.54) | 5.85 (2.13) | 1.55 (1.2) |
Total number of genes: 708. Number of DA genes: 100. The extended Bonferroni threshold 1.0.