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. 2010 Jan;184(1):253–265. doi: 10.1534/genetics.109.109587

TABLE 2.

Population genetic summary statistics

n (nanc) L S π θW h ZnS TD FWH
Dox
    All data 71 2342 155 0.00509 0.01396 6*** 0.52** −2.19*** −25.95
Population
    Nicewicz 12 (0) 5521 19 0.00057 0.00114 4* 0.80** −2.17** —
    Tremont 34 (0) 5956 12 0.00045 0.00049 7 0.35 −0.29 0.06
    Winters 12 (0) 60601 8 0.0004 0.00044 3 0.76* −0.34 —
    Africa 5 (2) 2343 116 0.02945 0.02376 3* 0.97** 1.82* −1.20
Allele
    Derived 67 5511 22 0.00044 0.00084 8* 0.31 −1.48* 0.03
    Ancestral 4 2388 84 0.01982 0.01919 4 0.5 0.35 2.33
MDox
    All data 69 2788 118 0.0023 0.00918 10*** 0.32* −2.58*** −24.57
Population
    Nicewicz 12 (0) 4401 12 0.00045 0.0009 3* 0.83* −2.09*** 0.15
    Tremont 33 (0) 4507 9 0.00017 0.00049 5 0.25 −1.98** 0.18
    Winters 12 (0) 4508 1 0.00004 0.00007 2 — −1.14* 0.15
    Africa 5 (3) 2788 103 0.01772 0.01859 4 0.37 −0.36 6.40
Allele
    Derived 65 4400 18 0.00018 0.00086 8 0.26 −2.40*** 0.15
    Ancestral 4 2815 92 0.01812 0.0186 4 0.41 −0.27 4.33
Nmy
    All data 115 5335 155 0.0009 0.00553 11*** 0.40* −2.76*** −91.63***
Population
    Nicewicz 24 (0) 7461 0 0 0 1 — — —
    Tremont 66 (1) 5403 60 0.00034 0.00233 7*** 0.84*** −2.88*** −36.19**
    Winters 12 (1) 5385 121 0.00374 0.00744 2*** 1.00*** −2.32** −72.88***
    Africa 5 (0) 7311 60 0.00372 0.00359 4*** 0.47 0.315 −3.50
Allele
    Derived 113 7310 67 0.00028 0.00179 11*** 0.41** −2.69*** −29.72**
    Ancestral
 2
 5402
 66
 0.01222
 0.01222
 2
 1.00
 —
 —

n, number of chromosomes sampled; nanc, number of ancestral alleles present in each population sample; L, total number of sites analyzed, excluding alignment gaps; S, number of segregating sites; h, number of haplotypes; π, average number of pairwise differences (Nei 1987); θW, Watterson's estimator of population diversity (Watterson 1975); ZnS, average pairwise R2 (Kelly 1997); TD, Tajima's D (Tajima 1989); FWH, Fay and Wu's H (Fay and Wu 2000). *P < 0.05; **P < 0.01; ***P < 0.001.