Table 2.
Composition of the 11 superfamilies of predicted CATH domains chosen for target selection by the Midwest Center for Structural Genomics and analysed using GeMMA and comparative protein modelling
| Superfamily | Total sequences | Annotated sequences (% of total) | Annotation types |
|---|---|---|---|
| 3.20.20.140 | 15 932 | 4355 (27.3) | 55 |
| 3.30.450.20 | 29 871 | 8859 (29.7) | 17 |
| 3.30.450.40 | 10 922 | 1702 (15.6) | 20 |
| 3.30.930.10 | 15 250 | 7888 (51.7) | 31 |
| 3.40.30.10 | 38 265 | 3182 (8.3) | 86 |
| 3.40.50.1000 | 20 614 | 2240 (10.9) | 80 |
| 3.40.50.1820 | 48 416 | 3570 (7.4) | 127 |
| 3.40.50.620 | 35 974 | 12 022 (33.4) | 75 |
| 3.40.630.30 | 27 036 | 1384 (5.1) | 77 |
| 3.90.1200.10 | 5671 | 383 (6.8) | 25 |
| 3.90.226.10 | 19 323 | 4838 (25.0) | 47 |