Table 1.
Relative synonymous codon usage for all the genes of 32 mycobacteriophages was calculated. AA and N are the amino acid and number of codons, respectively.
| AA | Condon | N | RSCU | AA | Condon | N | RSCU |
|---|---|---|---|---|---|---|---|
| Phe | UUU | 1795 | (0.20) | Ser | UCU | 2127 | (0.40) |
| UUC | 15765 | (1.80) | UCC | 7032 | (1.32) | ||
| Leu | UUA | 195 | 0.03 | UCA | 1889 | (0.35) | |
| UUG | 5037 | (0.66) | UCG | 10888 | (2.04) | ||
| Tyr | UAU | 2447 | (0.31) | Cys | UGU | 874 | (0.33) |
| UAC | 13288 | (1.69) | UGC | 4496 | (1.67) | ||
| ter | UAA | 393 | (0.00) | Ter | UGA | 1365 | (0.00) |
| ter | UAG | 388 | (0.00) | Trp | UGG | 11727 | (1.00) |
| Leu | CUU | 2805 | (0.37) | Pro | CCU | 3503 | (0.42) |
| CUC | 13867 | (1.82) | CCC | 10146 | (1.21) | ||
| CUA | 1400 | (0.18) | CCA | 2630 | (0.31) | ||
| CUG | 22302 | (2.93) | CCG | 17369 | (2.06) | ||
| His | CAU | 2427 | (0.40) | Arg | CGU | 5190 | (0.83) |
| CAC | 9611 | (1.60) | CGC | 16237 | (2.60) | ||
| Gln | CAA | 3076 | (0.30) | CGA | 3195 | (0.51) | |
| CAG | 17766 | (1.70) | CGG | 9987 | (1.60) | ||
| Ile | AUU | 3524 | (0.40) | Thr | ACU | 2990 | (0.32) |
| AUC | 21992 | (2.52) | ACC | 20215 | (2.20) | ||
| AUA | 636 | (0.07) | ACA | 2910 | (0.32) | ||
| Met | AUG | 11923 | (1.00) | ACG | 10698 | (1.16) | |
| Asn | AAU | 2886 | (0.29) | Ser | AGU | 1693 | (0.32) |
| AAC | 16738 | (1.71) | AGC | 8424 | (1.58) | ||
| Lys | AAA | 3185 | (0.29) | Arg | AGA | 692 | (0.11) |
| AAG | 18997 | (1.71) | AGG | 2110 | (0.34) | ||
| Val | GUU | 4218 | (0.40) | Ala | GCU | 7738 | (0.50) |
| GUC | 18361 | (1.73) | GCC | 26730 | (1.72) | ||
| GUA | 1855 | (0.17) | GCA | 6591 | (0.42) | ||
| GUG | 17981 | (1.70) | GCG | 21142 | (1.36) | ||
| Asp | GAU | 8082 | (0.42) | Gly | GGU | 10057 | (0.78) |
| GAC | 30303 | (1.58) | GGC | 27920 | (2.17) | ||
| Glu | GAA | 8983 | (0.50) | GGA | 5241 | (0.41) | |
| GAG | 26657 | (1.50) | GGG | 8345 | (0.65) |