Table 3.
All mir-22 predicted target genes that were overexpressed in clear cell ovarian cancer
| Gene | Description | Microarray fold change (clear cell vs. NOSE) | Microarray fold change (mir-22 overexpression) | Algorithm |
|---|---|---|---|---|
| EDC3 | Enhancer of mRNA decapping 3 homolog (S. cerevisiae) | +2.03 | −2.22 | T, P |
| FRAT2 | Frequently rearranged in advanced T-cell lymphomas 2 | +3.23 | −1.70 | T |
| EVI1 | Ecotropic viral integration site 1 | +22.41 | −1.59 | T |
| ARID3B | AT-rich interactive domain 3B (BRIGHT-like) | +4.17 | −1.58 | T, P |
| CHD7 | Chromodomain helicase DNA-binding protein 7 | +2.35 | −1.58 | T, P |
| CLIP2 | CAP-GLY domain containing linker protein 2 | +2.64 | −1.48 | P |
| AGBL5 | ATP/GTP binding protein-like 5 | +2.09 | −1.44 | T, P |
| FBX046 | F-box protein 46 | +2.23 | −1.43 | T |
| ZCCHC14 | Zinc finger, CCHC domain containing 14 | +2.14 | −1.42 | T |
| PDSS1 | Prenyl (decaprenyl) diphosphate synthase, subunit 1 | +2.05 | −1.40 | T |
| FAM125B | Family with sequence similarity 125, member B | +2.55 | −1.37 | T |
| BIN1 | Bridging integrator 1 | +4.75 | −1.26 | P |
| CYTH3 | Cytohesin 3 | +2.12 | −1.26 | T, P |
| MTHFD2 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase | +4.34 | −1.25 | T, P |
| POGK | Pogo-transposable element with KRAB domain | +2.41 | −1.19 | T, P |
| CCDC47 | Coiled-coil domain containing 47 | +2.07 | −1.18 | T, P |
| MYST3 | MYST histone acetyltransferase (monocytic leukemia) 3 | +2.09 | −1.17 | T |
| ARRB1 | Arrestin, β 1 | +2.25 | −1.09 | T |
| RGS14 | Regulator of G protein signaling 14 | +2.09 | −1.09 | T |
| ACVR1B | Activin A receptor, type IB | +4.37 | −1.07 | T |
| ZNF618 | Zinc finger protein 618 | +2.59 | −1.06 | T |
| PPP1R9A | Protein phosphatase 1, regulatory (inhibitor) subunit 9A | +2.40 | −1.05 | T |
| MPHOSPH9 | M-phase phosphoprotein 9 | +2.35 | 1.00 | P |
| ANKRD57 | Ankyrin repeat domain 57 | +3.21 | +1.02 | P |
| ERBB3 | v-erb-b2 Erythroblastic leukemia viral oncogene homolog 3 (avian) | +13.27 | +1.08 | T, P |
| PLAGL2 | Pleiomorphic adenoma gene-like 2 | +3.82 | +1.11 | T, P |
| IGF2BP3 | IGF 2 mRNA-binding protein 3 | +8.48 | +1.19 | P |
Of 27 genes, 22 were down-regulated after mir-22 overexpression. Prediction algorithms: T, TargetScan; P, PicTar; M, miRanda.