Table 1.
Group | Species name | Annotationa | Nucleotide positions (bp)b | Accession number | Reference |
---|---|---|---|---|---|
Protist | Reclinomonas americana | rpl10 | 5963–6544 | AF007261 | Lang et al.10 |
Green alga | Chaetosphaeridium globosum | orf126 | 38 019–38 399 | AF494279 | Turmel et al.22 |
Chara vulgaris | − | 30 284–30 781 | AY267353 | Turmel et al.23 | |
Bryophyte | Marchantia polymorpha | orf168 | 184 854–185 360 | M68929 | Oda et al.14 |
Megaceros aenigmaticus | ORF-bryo1 | 118 155–118 631 | EU660574 | Li et al.7 | |
Physcomitrella patens | orf187 | 40 074–40 637 | AB251495 | Terasawa et al.20 | |
Gymnosperm | Cycas taitungensis | − | 48 332–48 838 | AP009381 | Chaw et al.24 |
Angiosperm | Bambusa oldhamii | −c | 162 094–162 555d | EU365401 | Lin et al. (unpublished) |
Brassica napus | −c | 219 858–219 707d | AP006444 | Handa26 | |
Carica papaya | − | 401 684–402 172 | EU431224 | Rice et al. (unpublished) | |
Helianthus annuus | − | 1095–1583 | AM183222 | Placido et al.27 | |
Nicotiana tobacum | orf159b | 360 762–360 283 | BA000042 | Sugiyama et al.19 | |
Oryza sativa | −c | 197 408–196 959d | BA000029 | Notsu et al.25 | |
Solanum lycopersicum | − | 430 703–430 348e | FJ374974 | Carrari et al. (unpublished) | |
Tripsacum dactyloides | −c | 384 034–383 929d | DQ984517 | Allen et al. (unpublished) | |
Vitis vinifera | orf159 | 156 298–155 822 | FM179380 | Goremykin et al.21 |
aMinus (−) means no annotation given in the registered sequence.
bNucleotide positions are indicated with regard to the direction of ORF.
cPseudogene.
dEach nucleotide positions corresponds a region that showed homology to the entire ORF in other angiosperms.
eThe 3′-terminal region of the ORF is missing due to a gap upstream of the position 430 348. The complete ORF has been determined in this study (accession no. AB518477).