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. 2010 Feb 10;5(2):e9151. doi: 10.1371/journal.pone.0009151

Table 3. A new set of magnetotaxis-related genes outside the M. magneticum AMB-1 magnetosome island.

CDS (a) Start (b) Stop (c) MAI (d) % id. (e) % sim. (f) Gene (g)
NEW_GENE 425806 424787 MamK 54.5 71.5 mamK-like
amb0400 431795 432820 MamD 36.4 51.3 mamD-like
amb0407 438420* 438208 MamL 75.6 80.7 mamL-like
MAGMM0452 440560 439811 MamJ 15.9 29.2 mamJ-like
amb0410 443319** 440944 MamE 51.9 62.3 mamE-like
amb0412 445749 446084 MamF 59.4 73.0 mamF-like
MAGMM0458 446504 447079 MamQ 37.5 50.2 mamQ-like

a) Gene names used in the published genome of AMB-1 [8]. A new ORF we identified is temporarily referred to as NEW_GENE. b–c) Position of putative initiation codon on the bacterial chromosome. *, annotated initiation codon changed adding 18 residues to the gene product. **, annotated initiation codon changed adding 206 residues to the gene product. The entire MamE-like sequence is given in Figure S1. c) Position of stop codon on the bacterial chromosome. d) Homologous proteins encoded within the magnetosome island. e–f) Percentage of identity and similarity (BLOSSUM62 matrix) between putative proteins encoded by genes listed in a) and Mam proteins listed in d). g) Gene names used hereafter.