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. Author manuscript; available in PMC: 2011 Jan 15.
Published in final edited form as: Bioorg Med Chem. 2009 Dec 26;18(2):953. doi: 10.1016/j.bmc.2009.11.029

Table 1.

Inhibitory concentrations (IC50, µM) against isolated TS and DHFRa

TS DHFR
compd Humanb E. colib T.gondiic Humand E.colie T. gondiic
4 0.54 >180 1.8 0.21 0.016 0.17
5 5.4 230 27 4.0 0.020 2.2
Raltitrexedf 0.38 5.7 0.9 21 23 2.3
Pemetrexedg 9.5 76 2.8 6.6 230 0.46
MTX 29 90 18 0.022 0.0066 0.011
a

The percent inhibition was determined at a minimum of four inhibitor concentrations within 20% of the 50% point. The standard deviations for determination of 50% points are within ±10% of value given.

b

Kindly provided by Dr. Frank Maley, New York State Department of Health, Albany, NY.

c

Kindly provided by Dr. K. Anderson, Yale University.

d

Kindly provided by Dr. J. H. Freisheim, Medical College of Ohio, Toledo, OH.

e

Kindly provided by Dr. R. L. Blakley, Jude Children’s hospital, Memphis TN.

f

Kindly provided by Dr. Ann Jackman, Institute of Cancer Research, Sutton, Surrey, UK.

g

Kindly provided by Dr. Chuan Shih, Eli Lilly and Co.

Dihydrofolate Reductase (DHFR) Assay.42 All enzymes were assayed spetrophotometrically in a solution containing 50 µM dihydrofolate, 80 µM NADPH, 0.05 M Tris-HCl, 0.001 M 2-mercaptoethanol, and 0.001 M EDTA at pH 7.4 and 30 °C. The reaction was initiated with an amount of enzyme yielding a change in OD at 340 nm of 0.015/min.

Thymidylate Synthase (TS) Assay. TS was assayed spectrophotometrically at 30 °C and pH 7.4 in a mixture containing 0.1 M 2-mercaptoethanol, 0.0003 M (6R,S)-tetrahydrofolate, 0.012 M formaldehyde, 0.02 M MgCl2, 0.001 M dUMP, 0.04 M Tris-HCl, and 0.00075 M NaEDTA. This was the assay described by Wahba and Friedkin,43 except that the dUMP concentration was increased 25-fold according to the method of Davisson et al.44 The reaction was initiated by the addition of an amount of enzyme yielding a change in absorbance at 340 nm of 0.016/min in the absence of inhibitor.