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. 2009 Nov 19;114(1):90–100. doi: 10.1093/toxsci/kfp285

TABLE 1.

Summary of Microarray Results

(A) Filtered by ITE/DMSO Total: 4521
Fold change
    > 2.5 or < 0.4 255
    > 2.0 or < 0.5 482
    > 1.5 or < 0.67 1271
(B) Filtered by TCDD/DMSO Total: 3257
Fold change
    > 2.5 or < 0.4 269
    > 2.0 or < 0.5 458
    > 1.5 or < 0.67 1201
(C) Filtered by ITE/TCDD 21a
Fold change
    > 2.0 or < 0.5 0
    > 1.5 or < 0.67 0

Note. Microarray data were analyzed by Significance Analysis of Microarrays as described in Materials and Methods. In parts A and B, the total number of genes (probe sets) meeting the < 5% false discovery probability is shown in the first row of each table. These were further filtered by different magnitudes of fold change as shown. Calculated p-values were all < 0.015 at this estimated false discovery rate. In part C, criteria were relaxed as indicated.

a

For all but one of these, the q value was 14–42%; p values were all ≤ 0.0016.