TABLE 1.
(A) Filtered by ITE/DMSO | Total: 4521 |
Fold change | |
> 2.5 or < 0.4 | 255 |
> 2.0 or < 0.5 | 482 |
> 1.5 or < 0.67 | 1271 |
(B) Filtered by TCDD/DMSO | Total: 3257 |
Fold change | |
> 2.5 or < 0.4 | 269 |
> 2.0 or < 0.5 | 458 |
> 1.5 or < 0.67 | 1201 |
(C) Filtered by ITE/TCDD | 21a |
Fold change | |
> 2.0 or < 0.5 | 0 |
> 1.5 or < 0.67 | 0 |
Note. Microarray data were analyzed by Significance Analysis of Microarrays as described in Materials and Methods. In parts A and B, the total number of genes (probe sets) meeting the < 5% false discovery probability is shown in the first row of each table. These were further filtered by different magnitudes of fold change as shown. Calculated p-values were all < 0.015 at this estimated false discovery rate. In part C, criteria were relaxed as indicated.
For all but one of these, the q value was 14–42%; p values were all ≤ 0.0016.