Table 1.
Primer and/or probe sequences for genotyping
Polymorphism | Sequence |
---|---|
UGT1A1 | |
PCR primers | |
FP | 6FAM – GTC ACG TGA CAC AGT CAA AC 3′ |
RP | 5′ GTT TCT TTT TGC TCC TGC CAG AGG TT 3′ |
UGT1A3 | |
PCR primers | |
FP | 5′ AGT GAG CAC AGG GTC AGA CGT 3′ |
RP | 5′ TCC AGG ATG GAT CAG TTC CA 3′ |
Sequencing primers | |
FP1 | 5′ GCT CAG TGA CAA GGT AAT TA 3′ |
RP1 | 5′ GAA GGC TAT TAT GAC AAG GA 3′ |
FP2 | 5′ CAC ACT CAA CTG TAC TTT GAA 3′ |
RP2 | 5′ CTT TGC ATG AAT GTC ATG T 3′ |
UGT2B4 | |
PCR primers | |
FP | 5′ TTC ATC ATG ATC AAC CAG TGA 3′ |
RP | 5′ CTT CCA GCC TCA GAC GTA AT 3′ |
UGT2B7 | |
PCR primers | |
FP | 5′ GGC TTA TTC GAA ACT CCT GGA A 3′ |
RP | 5′ TGG AGT CCT CCA ACA AAA TCA A 3′ |
Probes | |
C | 6FAM – AGT TTC CAc ATC CAC- MGBNFQ |
T | VIC – TTT CCA tAT CCA CTC TT- MGBNFQ |
UGT2B15 | |
PCR primers | |
FP | 5′ GCC AGT AAA TCA TCT GCT ATT AAA TTA GAA 3′ |
RP | 5′ GCA TCT TTA CAG AGC TTG TTA CTG TAG TCA TA 3′ |
Probes | |
T | 6FAM – TCA GAA GAG AAT CTT CCA AAT AAT TT- MGBNFQ |
G | VIC TCA GAA GAG AAT CTT CCA AAT CAT TT- MGBNFQ |
UGT2B17 | |
PCR primers | |
Exon1 FP | 5′ TGA AAA TGT TCG ATA GAT GGA CAT ATA GTA 3′ |
Exon1 RP | 5′ GAC ATC AAA TTT TGA CTC TTG TAG TTT TC 3′ |
Deletion FP | 5′ TTT AAT GTT TTC TGC CTT ATG CCA C 3′ |
Deletion RP | 5′ AGC CTA TGC AAT TTT CAT TCA ACA TAG 3′ |
Probes | |
Exon1 | 6FAM – TAC ATT TTG GTC ATA TTT TTC ACA ACT ACA AGA ATT GT- MGBNFQ |
Deletion | JOE – ACT ACA CTG AGA TTT ACA AAA GAA TTC TGT CAG GAT ATA G- MGBNFQ |
SULT1A1 | |
PCR primers | |
FP | 5′ AGT TGG CTC TGC AGG GTT TCT 3′ |
RP | 5′ ACC ACG AAG TCC ACG GTC TC 3′ |
Probes | |
R | VIC – TGG CAG GGA GCG C- MGBNFQ |
H | 6FAM – CTG GCA GGG AGT GC- MGBNFQ |