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. 2010 Feb 12;6(2):e1000842. doi: 10.1371/journal.pgen.1000842

Table 1. Top 4 SNPs associated with diabetic nephropathy in a genome-wide screening.

Nephropathy(a) p for HWE(b) Control(a) p for HWE(b) Smallest p (model)
rs2268388 (C > T) 0.25 (413/276/48) 0.83 0.17 (379/155/18) 0.66 1.4×10−6 (allelic)
Ch 12, ACACB
rs2250736 (C > T) 0.278 (394/288/63) 0.32 0.338 (233/262/55) 0.13 0.0002 (dominant)
Ch 3, CACNA1D
rs3777587 (G > A) 0.523 (156/399/191) 0.05 0.459 (166/269/120) 0.57 0.0002 (dominant)
Ch 6, CLIC5
rs7148607 (T > C) 0.34 (318/353/76) 0.06 0.39 (219/243/94) 0.13 0.0003 (recessive)
Ch 14

(a)minor allele frequencies are shown, and genotype counts are in parenthesis.

(b)p values for Hardy Weinberg equilibrium test.