TABLE 1.
Parameters derived from fitting dose-response dataa
Condition | No. of modifications (modification) | Parameterb |
|||
---|---|---|---|---|---|
[Asp]1/2 (μM) | vu (nM/s) | vs (nM/s) | n | ||
Vesicles | 0 (EEEE) | 2.2 ± 0.4 | 1.5 ± 0.1 | 2.6 ± 0.1 | 1.1 ± 0.3 |
1 (QEEE) | 3.0 ± 0.4 | 1.6 ± 0.2 | 3.7 ± 0.4 | 1.3 ± 0.2 | |
2 (QEQE) | 3.2 ± 1.3 | 1.2 ± 0.1 | 2.9 ± 0.1 | 1.2 ± 0.1 | |
3 (QEQQ) | 7.3 ± 1.6 | 0.3 ± 0.1 | 0.7 ± 0.1 | 1.3 ± 0.05 | |
3 (QQEQ) | 8.6 ± 0.8 | 0.5 ± 0.05 | 3.0 ± 0.4 | 1.2 ± 0.2 | |
1 dimer/disc | 0 (EEEE) | 1.8 ± 0.5 | 2.8 ± 0.5 | 5.1 ± 0.3 | 1.2 0± 0.1 |
1 (QEEE) | 1.9 ± 0.6 | 3.0 ± 0.1 | 6.1 ± 0.05 | 1.1 ± 0.2 | |
2 (QEQE) | 2.5 ± 0.7 | 3.2 ± 0.5 | 5.2 ± 0.9 | 1.2 ± 0.1 | |
3 (QEQQ) | 3.2 ± 0.4 | 1.1 ± 0.05 | 3.1 ± 0.05 | 1.3 ± 0.1 | |
3 (QQEQ) | 5.7 ± 1.7 | 1.9 ± 0.8 | 4.1 ± 1.3 | 1.2 ± 0.2 | |
∼3 dimers/disc | 0 (QEEE) | 0.8 ± 0.3 | 2.3 ± 0.2 | 4.8 ± 0.5 | 1.0 ± 0.2 |
1 (QEEE) | 1.5 ± 0.7 | 2.8 ± 0.4 | 5.2 ± 0.8 | 1.1 ± 0.1 | |
2 (QEQE) | 2.5 ± 0.4 | 2.7 ± 0.1 | 5.2 ± 0.1 | 0.9 ± 0.05 | |
3 (QEQQ) | 7.1 ± 1.4 | 0.9 ± 0.05 | 3.0 ± 0.1 | 1.1 ± 0.3 | |
3 (QQEQ) | 3.6 ± 0.7 | 1.0 ± 0.1 | 3.4 ± 0.3 | 1.0 ± 0.2 |
Data shown in Fig. 5 and 6 were fit to the relationship v = vu + (vs[Asp]n)/([Asp]1/2n + [Asp]n) where vu is the “unstimulated” initial rate (i.e., the rate in the absence of aspartate), vs is the “maximally stimulated” initial rate (i.e., the rate at saturating aspartate), [Asp]1/2 is the aspartate concentration at which stimulation of the initial rate is half maximal, and n is the Hill coefficient.
The mean values and standard deviations for these parameters derived from fitting dose-response data from at least three independent experiments determining initial rates of methylation for Tar with 0 to 3 adaptational modifications and in conditions with many potentially interacting neighboring receptor dimers (vesicles), no potentially interacting neighboring receptor dimers (1 dimer/disc), or few potentially interacting neighboring receptor dimers (∼3 dimers/disc) are shown.