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. 2009 Dec 18;76(4):1125–1134. doi: 10.1128/AEM.02256-09

TABLE 2.

Analyses of translated amino acid sequences of narG and nosZ derived from fen soil

Depth of soil layer (cm) narG
nosZ
No. of clonesa % Dissimilarityb % Library coverage No. of OTUs observed No. of OTUs estimated by:c
Hd No. of clonesa % Dissimilarityb % Library coverage No. of OTUs observed No. of OTUs estimated by:c
Hd
ACE Bootstrap Chao1 Jacknife ACE Bootstrap Chao1 Jacknife
0-10 51 0 53 36 68 46 64 63 3.5 61 0 77 26 45 32 22 43 3.0
41 90 12 18 14 14 17 1.8 14 95 10 13 11 12 13 1.8
10-20 30 0 40 24 60 31 46 44 3.1 52 0 77 22 41 27 35 35 2.8
41 87 8 14 10 10 12 1.4 14 95 8 13 9 10 11 1.6
20-30 80 0 81 33 56 40 41 48 3.0 47 0 60 27 82 34 61 62 3.0
41 99 8 9 9 8 9 1.6 14 87 12 21 14 20 19 2.0
30-40 22 0 59 14 30 18 21 23 2.5 38 0 76 16 31 20 25 25 2.4
41 95 5 6 5 5 6 1.4 14 97 4 5 4 4 5 0.8
Total 191 0 94 62 66 70 65 73 3.9 196 0 87 51 96 62 84 88 3.3
41 98 15 19 19 18 20 2.0 14 97 18 25 21 22 24 2.1
a

Number in the library.

b

Percent sequence dissimilarity needed for OTU definition.

c

Number of genotypes estimated using the ACE, bootstrap, Chao1, and Jackknife richness estimators.

d

Shannon-Weaver diversity index.