TABLE 2.
Depth of soil layer (cm) |
narG |
nosZ |
||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
No. of clonesa | % Dissimilarityb | % Library coverage | No. of OTUs observed | No. of OTUs estimated by:c |
Hd | No. of clonesa | % Dissimilarityb | % Library coverage | No. of OTUs observed | No. of OTUs estimated by:c |
Hd | |||||||
ACE | Bootstrap | Chao1 | Jacknife | ACE | Bootstrap | Chao1 | Jacknife | |||||||||||
0-10 | 51 | 0 | 53 | 36 | 68 | 46 | 64 | 63 | 3.5 | 61 | 0 | 77 | 26 | 45 | 32 | 22 | 43 | 3.0 |
41 | 90 | 12 | 18 | 14 | 14 | 17 | 1.8 | 14 | 95 | 10 | 13 | 11 | 12 | 13 | 1.8 | |||
10-20 | 30 | 0 | 40 | 24 | 60 | 31 | 46 | 44 | 3.1 | 52 | 0 | 77 | 22 | 41 | 27 | 35 | 35 | 2.8 |
41 | 87 | 8 | 14 | 10 | 10 | 12 | 1.4 | 14 | 95 | 8 | 13 | 9 | 10 | 11 | 1.6 | |||
20-30 | 80 | 0 | 81 | 33 | 56 | 40 | 41 | 48 | 3.0 | 47 | 0 | 60 | 27 | 82 | 34 | 61 | 62 | 3.0 |
41 | 99 | 8 | 9 | 9 | 8 | 9 | 1.6 | 14 | 87 | 12 | 21 | 14 | 20 | 19 | 2.0 | |||
30-40 | 22 | 0 | 59 | 14 | 30 | 18 | 21 | 23 | 2.5 | 38 | 0 | 76 | 16 | 31 | 20 | 25 | 25 | 2.4 |
41 | 95 | 5 | 6 | 5 | 5 | 6 | 1.4 | 14 | 97 | 4 | 5 | 4 | 4 | 5 | 0.8 | |||
Total | 191 | 0 | 94 | 62 | 66 | 70 | 65 | 73 | 3.9 | 196 | 0 | 87 | 51 | 96 | 62 | 84 | 88 | 3.3 |
41 | 98 | 15 | 19 | 19 | 18 | 20 | 2.0 | 14 | 97 | 18 | 25 | 21 | 22 | 24 | 2.1 |
Number in the library.
Percent sequence dissimilarity needed for OTU definition.
Number of genotypes estimated using the ACE, bootstrap, Chao1, and Jackknife richness estimators.
Shannon-Weaver diversity index.