Table 1.

Gene name, description, IPI number, log2 ratio (CAN WE CHANGE THESE TO DIRECT RATIO?), PeptideProphet and ProteinProphet probabilities for the differentially abundant glycoproteins that were identified by targeted MS/MS analysis.

Gene	Description	IPI	log2 Ratio	PeptideProphet	ProteinProphet
Ahsg	alpha-2-HS-glycoprotein	IPI001 28249	−0.39	0.62	0.6
Apob	apolipoprotein B	IPI003 50772	0.53	1.00	1
C9	complement component 9	IPI002 30718	−0.35	0.59	1
Cfh	complement component factor h	IPI001 30010	0.44	1.00	1
Cfi	complement component factor i	IPI003 20675	0.27	0.93	0
Hp	haptoglobin	IPI004 09148	0.04	1.00	1
Hpx	hemopexin	IPI001 28484	0.70	0.74	1
Igh1a	immunoglobulin heavy chain 1a (serum IgG2a)	IPI001 11657	−0.44	0.96	0
Ighg1	immunoglobulin heavy constant gamma 1 (G1m marker)	IPI003 08213	0.59	0.83	0.98
Itih3	inter-alpha trypsin inhibitor, heavy chain 3	IPI001 24725	0.50	1.00	1
Itih4	inter alpha-trypsin inhibitor, heavy chain 4	IPI001 19818	0.74	0.99	1
Klkb1	kallikrein B, plasma 1	IPI001 13057	−0.81	1.00	1
Lcat	lecithin cholesterol acyltransferase	IPI001 33500	0.22	0.60	1
Lifr	leukemia inhibitory factor receptor	IPI001 19299	0.64	1.00	1
LOC640207	similar to Ig heavy chain V region 102 precursor	IPI001 25877	0.38	1.00	1
Lrg1	leucine-rich alpha-2-glycoprotein 1	IPI001 29250	0.52	0.99	0.96
Pzp	pregnancy zone protein	IPI001 26194	0.27	0.92	1
Serpina10	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	IPI001 53258	−0.03	0.85	1
Serpina6	serine (or cysteine) peptidase inhibitor, clade A, member 6	IPI001 16105	−0.58	0.99	1
Serpind1	serine (or cysteine) peptidase inhibitor, clade D, member 1	IPI001 13227	0.28	1.00	0.88
Spil-6	serine protease inhibitor 1–6	IPI001 17857	0.46	0.71	1