Skip to main content
. Author manuscript; available in PMC: 2011 Feb 26.
Published in final edited form as: J Mol Biol. 2009 Dec 11;396(3):510. doi: 10.1016/j.jmb.2009.12.003

Fig. 9.

Fig. 9

Computational model used in the MD simulations. Rhodopsin (magenta) is embedded in an octane bilayer (blue) and immersed in a box of water (red/white) which is ~32 Å on each side. The retinal chromophore (black) is close to extracellular side of the receptor (top).