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. 2009 Nov 9;285(6):3608–3616. doi: 10.1074/jbc.M109.066431

TABLE 1.

SAFB1/SAFB2 target genes that also contained SAFB-bindings sites in their promoter regions

The table contains 24 genes listed in alphabetical order that were identified in two independent analyses, in the ChIP-on-chip study (n = 818) and in the gene expression array analysis (n = 716).

Accession no. Official gene symbol Gene name -Fold change (siSAFB)
1 NM_000425 L1CAM L1 cell adhesion molecule isoform 1 precursor 1.89
2 NM_005252 FOS v-fos FBJ murine osteosarcoma viral oncogene homolog 1.63
3 NM_002800 PSMB9 Proteasome β9 subunit isoform 1 proprotein 1.58
4 X56841 HLA-E HLA-E 1.52
5 NM_002228 JUN v-jun avian sarcoma virus 17 oncogene homolog 1.49
6 NM_004529 MLLT3 Myeloid/lymphoid or mixed lineage leukemia (trithorax homolog) 1.37
7 NM_003337 UBE2B Ubiquitin-conjugating enzyme E2B 1.36
8 NM_014417 BBC3 BCL2-binding component 3 1.33
9 NM_002117 HLA-C Major histocompatibility complex 1.31
10 AF458589 PPP1R12A Myosin phosphatase target subunit 1 variant 1.24
11 NM_002419 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1.22
12 NM_002121 HLA-DPB1 Major histocompatibility complex 1.21
13 BC017093 RPL35A RPL35A protein 1.18
14 NM_004048 B2M β2-Microglobulin precursor 1.18
15 NM_000520 HEXA Hexosaminidase A preproprotein 1.11
16 NM_002623 PFDN4 Prefoldin 4 1.09
17 NM_017582 UBE2Q Ubiquitin-conjugating enzyme E2Q 1.05
18 NM_014141 CNTNAP2 Cell recognition molecule Caspr2 precursor 0.81
19 NM_003366 UQCRC2 Ubiquinol-cytochrome c reductase core protein II 0.79
20 NM_078469 BCCIP BRCA2 and CDKN1A-interacting protein isoform C 0.79
21 NM_001417 EIF4B Eukaryotic translation initiation factor 4B 0.77
22 NM_001005273 CHD3 Chromodomain helicase DNA-binding protein 3 isoform 1 0.77
23 NM_014649 SAFB2 Scaffold attachment factor B2 0.75
24 NM_005105 RBM8A RNA-binding motif protein 8A 0.64