Table 3.
Power comparison for V-Bay, the lasso, and single-marker GWA analysis from simulated data with 100,000 markers.
sample | loci | V-Bay | the lasso | single-marker |
---|---|---|---|---|
200 | 4 | 90.0% | 87.5% | 47.5% |
200 | 32 | 14.1% | 4.69% | 7.19% |
1000 | 4 | 97.5% | 77.5% | 60.0% |
1000 | 32 | 80.6% | 65.0% | 33.1% |
Phenotypes were simulated with a fixed total heritability of 0.9. The false discovery rate was controlled to 5% for all three analyses.