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. 2009 Dec 26;285(9):6024–6035. doi: 10.1074/jbc.M109.074351

TABLE 3.

Bader charge analysis and N1 protonation status for selected purine analogs

Molecule Xa X charge Ya Y charge N1(H)
Inosine =O −1.173 N1H
6-Mercaptopurine riboside -S- +0.164 H 0.020 N1
=S −0.231 N1H
6-Methylmercaptopurine riboside -S- +0.122 CH3 0.005 N1
6-Chloroguanosine -Cl −0.197 N1
Adenosine -N- −1.090 H 0.450 N1

a X indicates the non-ring atom connected to C6. Y indicates the atom(s) connected to X, if any.