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. 2009 Dec 28;78(3):1040–1048. doi: 10.1128/IAI.01009-09

TABLE 2.

Gene ontology classification of downregulated genes

Gene ontology term Counta %b Pc
Cytoskeleton 31 8.76 1.04 × 10−4
Intracellular 159 44.92 1.39 × 10−4
Alternative splicing 105 29.66 1.94 × 10−4
Cytoplasm 108 30.51 2.66 × 10−4
Intracellular part 151 42.66 5.08 × 10−4
Chromosomal rearrangement 12 3.39 7.19 × 10−4
Microtubule 11 3.11 1.11 × 10−3
Proto-oncogene 11 3.11 1.31 × 10−3
Cytoskeleton 14 3.95 1.35 × 10−3
Splice variant 73 20.62 2.40 × 10−3
a

Number of genes in this category.

b

Percentage of genes with annotation among all upregulated genes.

c

EASE P value.