Table I. F1-Values (%) of CRFSampler with Respect to Window Size.
Window size | a | b | c | d |
---|---|---|---|---|
1 | 10.01 | 10.02 | 15.30 | 17.34 |
5 | 14.08 | 17.50 | 19.65 | 20.49 |
9 | 14.76 | 18.58 | 19.81 | 20.89 |
F1-value is an even combination of precision (p) and recall (r) and defined as 2pr/(p + r). a, trained and tested using primary sequence; b, trained and tested using PSI-BLAST sequence profile; c, trained and tested using primary sequence and PSIPRED-predicted secondary structure; d, trained and tested using PSI-BLAST sequence profile and PSIPRED-predicted secondary structure confidence scores.