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. Author manuscript; available in PMC: 2010 Feb 22.
Published in final edited form as: Proteins. 2008 Oct;73(1):228–240. doi: 10.1002/prot.22057

Table I. F1-Values (%) of CRFSampler with Respect to Window Size.

Window size a b c d
1 10.01 10.02 15.30 17.34
5 14.08 17.50 19.65 20.49
9 14.76 18.58 19.81 20.89

F1-value is an even combination of precision (p) and recall (r) and defined as 2pr/(p + r). a, trained and tested using primary sequence; b, trained and tested using PSI-BLAST sequence profile; c, trained and tested using primary sequence and PSIPRED-predicted secondary structure; d, trained and tested using PSI-BLAST sequence profile and PSIPRED-predicted secondary structure confidence scores.