Table 4. Performance characteristics of Pentaplex PCR system with reference to “normal DNA” for the identification of MMR-deficient CRCs.
No. of Markers Displaying Allelic Variation | The Five Marker Panel* | The Three Marker Panel** | ||||||
Sensitivity (%) | Specificity (%) | PPV (%)# | NPV (%)+ | Sensitivity (%) | Specificity (%) | PPV (%)# | NPV (%)+ | |
5 | 76.3 (67.7–83.2) | 100 (96.3–100) | 100 (95.8–100) | 78.6 (70.6–84.8) | ||||
4 | 87.7 (80.4–92.5) | 100 (96.3–100) | 100 (96.3–100) | 87.6 (80.3–92.5) | ||||
3 | 93.9 (87.9–97.0) | 100 (96.3–100) | 100 (96.5–100) | 93.4 (87.0–96.8) | 88.6 (87.5–93.2) | 100 (96.3–100) | 100 (96.3–100) | 88.4 (81.1–93.1) |
2 | 95.6 (90.1–98.1) | 100 (96.3–100) | 100 (96.6–100) | 95.2 (89.2–97.9) | 93.9 (87.9–97.0) | 100 (96.3–100) | 100 (96.5–100) | 93.4 (87.0–96.8) |
1 | 97.4 (92.5–99.1) | 84.9 (76.5–90.6) | 88.1 (81.3–92.7) | 96.6 (90.3–98.8) | 97.4 (92.5–99.1) | 92.9 (86.1–96.5) | 94.1 (88.3–97.1) | 96.8 (91.1–98.9) |
Results are expressed as percentages (%), with 95% confidence intervals in parentheses.
*The Five Pentaplex Marker Panel composed of BAT25, BAT26, NR21, NR24 and NR27 markers.
**The Three Pentaplex Marker Panel composed of BAT26, NR21 and NR27 markers.
PPV = positive predictive value.
NPV = negative predictive value.