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. Author manuscript; available in PMC: 2011 Mar 15.
Published in final edited form as: J Infect Dis. 2010 Mar 15;201(6):912–922. doi: 10.1086/650699

Figure 1. Phylogenetic analysis of HCV core quasispecies.

Figure 1

Core genes were analyzed by Neighbor Joining method and standard bootstrap analysis (with 1000 replicates) with reference gentoype 1a and 1b strains (accession numbers M62321 and AF333324.1, respectively) using MacVector 10.2 software. A, nucleotide alignments. B, amino acid alignments. C, Alignment of HCV core proteins isolated from acute infection. Clustal alignments were performed with MacVector.