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. 2010 Jan 29;11:76. doi: 10.1186/1471-2164-11-76

Table 5.

Repetitive motifs containing transmembrane and extracellular proteins

ID BLASTX Pfam/Interpro L Repeat ESTs
cn349 Multicystatin No significant hit EC 2X DKIPKSVLEFGINKLELSNVFAHKDFSKIENAQMKVVSGYIYKFTLVYQFSEQEHKFEIQVWSKADQTLELISMKEIT 7
cn66 Unknown protein EGF-like domain EC 4X YVNNGSCSSNSTLFNFTSKNCEKSCG 22
cn65 Insect antifreeze protein EGF-like domain EC 5X LFNFTSKNCEKSCGESGY 10
cn131 Protein disulfide-isomerase domain containing protein Protein disulphide isomerase family EC 3X EEKEEK 9
cn85 Predicted protein Ricin-type beta-trefoil lectin domain EC 4X VLDVYG 8
cn81 Chitinase Glycoside hydrolase, family 18 domain, chitinase active site EC 2X YARGYELCKTPGDKLDKIFYAFLNPTTG
CiTo 53E07 Membrane associated protein No significant hit TM 9X FSFLLFFFFFSFWS 1
CiTo 12F11 No significant hit EGF-like domain, Metridin-like ShK toxin EC 3X AETGST 1
CiTo 13H10 Tenascin EGF domain TM 3X PNNCSG
CiTo 26C11 No significant hit No significant hit TM 3X EKCRCL 1
CiTo 2H11 No significant hit No significant hit EC 3X AKTAAE 1
CiTo 6G09 Cation diffusion facilitator family transporter Cation efflux protein
family
TM 3X GHGHSH 1

L, Localization; TM, transmembrane domain; EC, extracellular