Table 2.
Size of the regular expression (regex) and pattern complexity (L) for a selected subset of PROSITE signatures.
| PROSITE signature | Accession number | pattern size | L |
|---|---|---|---|
| RGD | PS00016 | 3 | 22 |
| ER_TARGET | PS00014 | 3 | 28 |
| PPASE | PS00387 | 7 | 41 |
| ALDEHYDE_DEHYDR_GLU | PS00687 | 8 | 44 |
| PROKAR_NTER_METHYL | PS00409 | 21 | 46 |
| GLY_RADICAL_1 | PS00850 | 9 | 77 |
| PEP_ENZYMES_PHOS_SITE | PS00370 | 12 | 96 |
| PUR_PYR_PR_TRANSFER | PS00103 | 13 | 102 |
| PILI_CHAPERONE | PS00635 | 18 | 226 |
| SIGMA54_INTERACT_2 | PS00676 | 16 | 313 |
| EFACTOR_GTP | PS00301 | 16 | 320 |
| ALDEHYDE_DEHYDR_CYS | PS00070 | 12 | 331 |
| ADH_ZINC | PS00059 | 13 | 478 |
| THIOLASE_1 | PS00098 | 19 | 637 |
| SUGAR_TRANSPORT_1 | PS00216 | 15 to 17 | 796 |
| FGGY_KINASES_2 | PS00445 | 21 to 22 | 2668 |
| PTS_EIIA_TYPE_2_HIS | PS00372 | 16 | 2758 |
| MOLYBDOPTERIN_PROK_3 | PS00551 | 27 to 28 | 3907 |
| SUGAR_TRANSPORT_2 | PS00217 | 26 | 6889 |