TABLE 1.
Species | n | L (Lc) | S | π | θW | DT | Shared polymorphisms | Fixed differences (nearly) | FST |
---|---|---|---|---|---|---|---|---|---|
C. ovalis NA | 26 | 1365 | 22 | 0.0035 | 0.0043 | −0.66 | |||
C. ovalis SH | 28 | (1365) | 26 | 0.0028 | 0.0049 | −1.57 | 7 | 0 (5) | 0.46 |
C. gracilis NA | 30 | 1365 | 47 | 0.0050 | 0.0053 | −0.24 | |||
C. gracilis SH | 14 | (1223) | 23 | 0.0044 | 0.0046 | −0.22 | 10 | 2 (5) | 0.54 |
C. erraticus NA | 14 | 1272 | 26 | 0.0062 | 0.0068 | −0.38 | |||
C. erraticus SH | 18 | (1209) | 33 | 0.0054 | 0.0075 | −1.14 | 12 | 0 (1) | 0.12 |
n, number of alleles sampled (twice the number of individuals); L, nominal (maximum) length of coding sequence determined for each allele (base pairs); Lc, length of shared homology for all alleles in sample (used to calculate π, θW, DT, and FST); S, number of segregating (polymorphic) sites; π, nucleotide diversity (heterozygosity); θW, population mutation parameter estimated from segregating sites; DT, Tajima's D; shared polymorphisms, sites where the same two nucleotides occur in both samples; fixed differences, sites fixed for different nucleotides in the two samples; (nearly), one sample is fixed for the nucleotide that is less frequent in the other sample, or the difference in nucleotide frequencies exceeds 0.75; FST, inbreeding (fixation) of subpopulations (hemispheres) relative to the total (nominal species), estimated by the method of Hudson et al. (1992).