Table 2.

Comparison between genes that were identified by transcript profiling in vivo (this study) and other in vivo techniques in A. pleuropneumoniae

Locus tag	Gene	TP	Other
APL_0030	prfC	↓	IVET (Fuller et al. 1999) STM (Sheehan et al. 2003)
APL_0771	lpdA	↓	STM (Fuller et al. 2000)
APL_1583	cpxC	↓	STM (Sheehan et al. 2003)
APL_1580	cps5b	↓	STM (Sheehan et al. 2003)
APL_0333	visC	↓	STM (Sheehan et al. 2003)
APL_1218	Fur	↓	STM (Sheehan et al. 2003)
APL_1388	APL_1388	↓	STM (Sheehan et al. 2003)
APL_0998	apxIVA	↑	SCOTS (Baltes et al. 2004)
APL_1684	fuci	↑	SCOTS (Baltes et al. 2004)
APL_0163	nrdD	↑	SCOTS (Baltes et al. 2004)
APL_1292	APL_1292	↓	SCOTS (Baltes et al. 2007)
APL_0282	potC	↓	SCOTS (Baltes et al. 2007)
APL_1474	dnaG	↓	SCOTS (Baltes et al. 2007)
APL_1401	rpsL	↓	SCOTS (Baltes et al. 2007)
APL_1752	nanE	↑	SCOTS (Baltes et al. 2007)

TP: Results obtained during transcript profiling

↑:Up-regulated

↓:Down-regulated