Skip to main content
. Author manuscript; available in PMC: 2011 Feb 16.
Published in final edited form as: Biochemistry. 2010 Feb 16;49(6):1105–1114. doi: 10.1021/bi901412a

Table 2.

Final distances of the substrate from key residues in the final bound state.a

Y38 Y42 R45 Y76 K80 H165
Pi 3.08±0.70 3.37±0.59 3.06±0.38 3.07±0.61 6.19±1.18 6.09±0.65
Pi2 4.28±0.45 4.51±0.24 3.08±0.12 2.63±0.10 2.67±0.10 5.30±0.88
G3P 3.84±0.85 3.59±0.62 4.82±0.85 4.17±1.60 5.15±1.53 6.41±1.91
G3P2− 4.62±0.51 3.18±0.51 3.10±0.16 3.82±0.61 5.71±0.98 3.43±0.51
a

The distances are given between the closest nucleophillic atoms on the residues and the phosphate group of the substrate, i.e., hydroxyl oxygens in tyrosine residues, Nζ in K80, and Nδ in H165. In the case of R45 distance represents the average of distances of the closest phosphate oxygens to Nε atoms. All the means and standard deviations are calculated for the last 10 ns of the simulations. For distance vs. time plots, see Figure S3 of Supporting Information.