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Alignment of the amino acid sequences of the capsid protein of the West Nile virus (WNV) with the Japanese encephalitis virus (JEV). Sequences derived from ten different isolates of WNV and JEV, respectively, were randomly selected from the public domain database for alignment. The GenBank accession number of each viral sequence is shown on the left. Red box shows the clathrin box present in the capsid of WNV but not in JEV.
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