Table 4.
Genes of the BcepMu prophage that have an increased expression in H2O2 exposed B. cenocepacia J2315 biofilms (30 min).
| Gene | BcepMu gene assignments | Annotation | Fold change in expression in H2O2-treated biofilms (30 min) vs untreated biofilms |
|---|---|---|---|
| IG3_584892 | IG upstream of BCAS0540 | 8.5 | |
| BCAS0540 | BcepMu16 | Hypothetical protein | 10.0 |
| BCAS0540A | BcepMu15 | Hypothetical protein | 9.3 |
| BCAS0540B | BcepMu14 | Hypothetical protein | No probe present on array |
| BCAS0541 | No BcepMu assignment | Hypothetical protein | 9.6 |
| IG3_601361 | IG between BcepMu14 and BcepMu13 | 12.8 | |
| BCAS0542 | BcepMu13 | Hypothetical protein | 7.7 |
| BCAS0543 | BcepMu12 | Putative phage transcriptional regulator | 10.1 |
| BCAS0544 | BcepMu11 | Hypothetical protein | 8.3 |
| BCAS0545 | BcepMu10 | Hypothetical protein | 1.7 |
| BCAS0546 | BcepMu9 | Tn552/IS1604 rve transposase | 2.6 |
| BCAS0547 | BcepMu8 | Putative DNA-binding phage protein | 3.8 |
| BCAS0548 | BcepMu7 | Hypothetical protein | 3.9 |
| BCAS0549 | BcepMu6 | Hypothetical protein | 3.7 |
| IG3_607288 | IG between BcepMu5 and BcepMu6 | 4.0 | |
| BCAS0550 | BcepMu5 | Hypothetical protein | 3.7 |
| BCAS0551 | BcepMu4 | Hypothetical protein | No probe present on array |
| IG3_608364 | IG between BcepMu3 and BcepMu4 | 2.7 | |
| BCAS0552 | BcepMu3 | Single-stranded DNA binding protein | 2.1 |
| BCAS0553 | BcepMu2 | Mu gp16 gemA | 1.7 |
| BCAS0554 | BcepMu1 | Mu protein C/Mor gp17 transcription regulator | 1.9 |
The results represent the fold change in expression in the treated biofilms compared to the expression in the untreated biofilms (based on the microarray analysis).