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. Author manuscript; available in PMC: 2011 Mar 1.
Published in final edited form as: Am J Med Genet A. 2010 Mar;152A(3):646–652. doi: 10.1002/ajmg.a.33299

Table 2.

Oligonucleotides used for amplification of human miRNAs and target gene binding sites

Gene# Forward Primer (5′-3′) Reverse Primer (5′-3′)
miR-96 TACCGAAGGGCCATAAACAG AGGCAGTGTAAGGCGATCTG
miR-182 AGCAGGAAGGGGGACTGT GCAGGGAAACACAGAGTGTCA
miR-183 AAGGTCATCTTGGGCTGATG GGCTCTCTGGGGACACACT
AQP5 TGGCTGCACAGTTAGAGAGG CGGCATTCAATGAACCAGTC
ATP2B4 TCCTTGGTAGTCACTTGTCATTTT TCACACTACTGGCGGATTTT
BTG1 TCTTGGGGATGGATTATGGA TCTGGGAGAAACTGAAACCA
CaBP1 CAGGATGTACTGGCGGATG GACATGCTGTGTGGGGTCT
Cav1.2 (96) CAAGAAGGCATTTTGCTTCA AAAGCTTGTCACACTCCAAATACA
Cav1.2 (182) TTGACAGCATGTTGCAGTTTC TTGGGCATACACAATGGTTG
Cav1 TGCATCAGCCGTGTCTATTC TCAGACTGCCAAAAATAGATGAA
CELSR1 CTGCCCTTGAAGTGGAGTG CCCTCTCAGTTCTGGCTTTG
CELSR2 CCTGCTCCTGTCTTGTGCTT GGGAGTCAATTTCCAGCGTA
EZRIN GAAACTTCATGCTGGCCTGT CTGTGTGTGCGAGAGTGCTT
GNG5 TTCCCAAACCACTCCTTATGA ATTGTATGCTGCTGCCAGTG
GRID1 TTCCCAATTTTCGAAGTCAG GGTTCCTCGTCTTCCCTTCT
KCC2 GGTTGCAAACCAAATCAAGAG ATTTTGTGCAGACGGGAGTC
KCNJ14 GTAGAGCACCCAGCCAAGAG CCTTTTGGCATTACAGAACCA
MITF (96) TTGGACTAGCACTGACTGAACTG AGCATCACCAATGTTTCCAAG
MITF (182) ATTTCTGCAGGTGGCAGGT TTCCTTTGTGCTTTTAACTTCCTA
MYRIP (96) TTGACAAAAATGTGTACTGTGTAAGC GATCAAAATCACTTGATGACAAAA
MYRIP (182) AAGTGCCTGCTCTGAAGGAG GGAAATGCACATAGCAGCAA
MYRIP (182) CAAGTGATTTTGATCTTTAGTGTCA ATCTTGGCCCCTCCAGTTAC
NCS1 TTGCCATCTATCGACCTTCC CAGGACAGGGGAGAGGAGAG
NEFL CAGATGCAAGCTATGTGCAA GTTAAAAGGGGCACTGACCA
PEX19 CAGCTATGGGGAACATCTGG GGCAGAAACCACAATGGAGT
PPP2CA CCTAATGGAAATGGGAAGAGC TCCAATGATTGTTTGCTGCT
RDX AGCTGAACCACCAACAGAGAA TGGAAAAGAGGCAATGGAAC
RYK TTGGACTAGGGGTACATTCTTACA CAAGGCAGACCAGGTATCTTTT
SLC6A6 GATCAAGGGCCTTATGTGGA TGTGAAAATTCTGCGGTCTG
TFCP2L3 (96) GCCATGTGAGAGCTGTGAAC GCATGTAGCAGGAGACCACA
TFCP2L3 (96) GCCCTAAGGCAGAAGATGAA TGTTTCGCTCAGGAAATTTTG
TFCP2L3 (96) GCCCAGAAACTTAGGAAGCA GATTCCCCCTCTCCCATTTA
TREK-1 GCTTGTTGAACGGTCCACTT TGGTCCATATCTAGGCTCAGTT
ZCCHC3 GTCCCAAAGCAGTGCACAAT TTTTAAAAGGGAGGGGCAAC
#

Round brackets: miRNA binding site