Table 1.
Structurally characterized ABC transporter systems, classified by TMD fold. The nomenclature of the fold classification is from33. Note that while the outward facing conformation generally corresponds to the ATP (or suitable analogue) bound state, exceptions are evident in the structures of ADP bound to Sav1866 and nucleotide free BtuCD.
transporter | organism | nucleotide state | inward/outward | PDB ID | resolution | reference |
---|---|---|---|---|---|---|
Type I ABC importer fold | ||||||
ModABC | A. fulgidus | apo | inward | 2ONK | 3.1 Å | 22 |
MalFGK | E. coli | ATP | outward | 2R6G | 2.8 Å | 23 |
ModAB | M. acetivorans | apo | inward | 3D31 | 3.0 Å | 25 |
MetNI | E. coli | apo | inward | 3DHW | 3.7 Å | 26 |
Type II ABC importer fold | ||||||
BtuCD | E. coli | apo or (VO2)4 | outward | 1L7V | 3.2 Å | 17 |
HI1470/1 | H. influenzae | apo | inward | 2NQ2 | 2.4 Å | 20 |
BtuCDF | E. coli | apo | occluded | 2QI9 | 2.6 Å | 21 |
ABC exporter fold | ||||||
Sav1866 | S. aureus | ADP | outward | 2HYD | 3.0 Å | 18 |
AMPPNP | outward | 2ONJ | 3.4 Å | 19 | ||
MsbA | S. typhimurium | AMPPNP | outward | 3B60 | 3.7 Å | 24 |
ADP- vanadate | outward | 3B5Z | 4.2 Å | |||
E. coli | apo | inward | 3B5W | 5.3 Å | ||
V. cholerae | apo | inward | 3B5X | 5.5 Å |