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. 2010 Mar 1;5(3):e9466. doi: 10.1371/journal.pone.0009466

Table 2. Genes most frequently published in AML expression studies.

Rank Gene symbol No. of references No. of platforms No. of differentially expressed features Gene name
1 HOXB2 12 6 32 homeobox B2
2 PBX3 12 5 31 pre-B-cell leukemia homeobox 3
3 HOXA9 11 4 35 homeobox A9
4 POU4F1 11 3 29 POU class 4 homeobox 1
5 TSPAN7 10 5 16 tetraspanin 7
6 MYH11 10 3 38 myosin, heavy chain 11, smooth muscle
7 RUNX1T1 10 3 34 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
8 TRH 10 3 21 thyrotropin-releasing hormone
9 HLA-DPA1 10 3 20 major histocompatibility complex, class II, DP alpha 1
10 HOXB5 9 5 32 homeobox B5
11 SPARC 9 5 16 secreted protein, acidic, cysteine-rich (osteonectin)
12 HOXA10 9 4 34 homeobox A10
13 RNASE2 9 4 18 ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
14 CD34 9 3 16 CD34 molecule
15 MEIS1 9 3 16 Meis homeobox 1
16 RUNX3 8 5 23 runt-related transcription factor 3
17 VCAN 8 5 22 versican proteoglycan
18 RBPMS 8 4 21 RNA binding protein with multiple splicing
19 HOXA4 8 4 18 homeobox A4
20 MN1 8 4 16 meningioma (disrupted in balanced translocation) 1
21 PRAME 8 4 11 preferentially expressed antigen in melanoma
22 JAG1 8 3 20 jagged 1 (Alagille syndrome)
23 ITM2A 8 3 18 integral membrane protein 2A
24 RGS10 8 3 17 regulator of G-protein signaling 10
25 PGDS * 8 2 12 prostaglandin D2 synthase, hematopoietic

The genes reported in at least eight independent studies are presented here. In order of preference, the genes are ranked by the number of independent studies, the number of unique platforms, and the total number of differentially expressed features.

*Gene symbol is not approved by HUGO Gene Nomenclature Committee.