Skip to main content
. 2010 Feb 3;5:16. doi: 10.1186/1748-7188-5-16

Table 4.

Summary of experiments on six host-parasite problem instances.

Tarzan Jane
Problem Tips Min Time Min Max Mean Mean Time
1 18 11 < 1 sec 11 11 11.0 11.4 sec

2 25 20 < 1 sec 20 20 20.0 40.6 sec

3 32 20 < 1 sec 20 20 20.0 44.0 sec

4 44 50+ < 1 sec 51 51 51.0 743.9 sec

5 54 44 < 1 sec 44 47 44.1 2166.8 sec

6 80 98* < 1 sec 99 105 101.13 4473.6 sec

Key: The second column indicates the sum of the number of tips in the host and parasite trees. The columns labeled "Min" indicate the best solutions found. Since Jane uses randomness, the columns "Max" and "Mean" indicate the worst and average optimal solutions found over 30 independent runs. The Tarzan solution marked with + used a type of host switch not permitted in Jane and the solution marked with an asterisk was incorrect due to strong timing incompatibilities. All experiments were performed on a commodity iMac Intel Core 2 Duo computer with clock speed of 2.66 GHz and 4 GB memory.