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. 2010 Mar 3;5(3):e9514. doi: 10.1371/journal.pone.0009514

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Boyko et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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Analysis of gene expression in S1_25 and C1 plants was done using Affymetrix microchips. The data from 3 chips per each experimental group were averaged, and two different cut-offs were performed. One was a 2-fold change and p-value of less than 0.05, and another–a 3-fold change and p-value of less than 0.01. A. Figure shows the number of up- and down-regulated genes belonging to the S1_25 group as compared to the C1 group. The numbers over the top of the bars show the gene number. B. Figure shows the percentile distribution of up- and down-regulated genes belonging to different pathways.