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. 2009 Dec 3;38(4):1123–1134. doi: 10.1093/nar/gkp1070

Table 1.

Oligonucleotide sequences

Cluster Sequence Strand
U/8-oxoG+1+5 5′ CTCTTAGTCAGGAATAAXTATXAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATYCATACTTACGACCCTCGCGTCCG 2
U/8-oxoG+22 5′ CTCTTAGTCAGGAATAAXTATXAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATTCAYACTTACGACCCTCGCGTCCG 2
U/8-oxoG15 5′ CTCTTAGTCAGGAATAAXTATXAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATTCATACYTACGACCCTCGCGTCCG 2
U/U+1 8-oxoG+5 5′ CTCTTAGTCAGGAATAAYTATXAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATYCATACTTACGACCCTCGCGTCCG 2
U/U+2 8-oxoG2 5′ CTCTTAGTCAGGAATAAXTATYAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATTCAYACTTACGACCCTCGCGTCCG 2
U/U+5 8-oxoG+1 5′ CTCTTAGTCAGGAATAAXTATYAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATYCATACTTACGACCCTCGCGTCCG 2
U/U-1 8-oxoG5 5′ CTCTTAGTCAGGAATAAXTATYAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATTCATACYTACGACCCTCGCGTCCG 2
U/U-2 8-oxoG+2 5′ CTCTTAGTCAGGAATAAYTATXAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATTCAYACTTACGACCCTCGCGTCCG 2
U/U-5 8-oxoG1 5′ CTCTTAGTCAGGAATAAYTATXAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATTCATACYTACGACCCTCGCGTCCG 2
Tandem 8-oxoG 5′ CTCTTAGTCAGGAATAAXTATXAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATTCATACTTACGACCCTCGCGTCCG 2
U control 5′ CTCTTAGTCAGGAATAAGTATGAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATTCAYACTTACGACCCTCGCGTCCG 2
No lesion control 5′ CTCTTAGTCAGGAATAAGTATGAATGCTGGGAGCGCAGGC 1
3′ GAGAATCAGTCCTTATTCATACTTACGACCCTCGCGTCCG 2

Y represents a uracil residue and X represents an 8-oxoG lesion. The lesions on strand 1 have been given a number relating their positions to the uracil residue on the complementary strand 2. The number denotes the base separation. A positive number is given if the lesion on strand 1 is in the 5′ direction to that on strand 2 and a negative number is given if the lesion on strand 1 is in the 3′ direction to that on strand 2. The U control oligonucleotide consists of a single uracil residue on strand 2.