Table 3.
The ten most frequent domains among the unmapped BESs of O. rufipogon.
| InterPro ID | Description | Mapped | Unmapped | p value | ||
|---|---|---|---|---|---|---|
| No. of genes with the domain | No. of genes without the domain | No. of genes with the domain | No. of genes without the domain | |||
| IPR000719 | Protein kinase, core | 731 | 4075 | 26 | 109 | 0.22 |
| IPR001611 | Leucine-rich repeat | 441 | 4365 | 47 | 88 | 1.10 × 10-5 |
| IPR001878 | Zinc finger, CCHC-type | 138 | 4668 | 12 | 123 | 7.30 × 10-5 |
| IPR002182 | NB-ARC | 345 | 4461 | 37 | 98 | 2.61 × 10-12 |
| IPR007527 | Zinc finger, SWIM-type | 63 | 4743 | 8 | 127 | 9.95 × 10-4 |
| IPR008271 | Serine/threonine protein kinase, active site | 569 | 4237 | 22 | 113 | 0.14 |
| IPR011009 | Protein kinase-like | 755 | 4051 | 29 | 106 | 0.07 |
| IPR013210 | Leucine-rich repeat, N-terminal | 222 | 4584 | 21 | 114 | 1.93 × 10-6 |
| IPR017441 | Protein kinase ATP binding, conserved site | 540 | 4266 | 21 | 114 | 0.13 |
| IPR017442 | Serine/threonine protein kinase-related | 628 | 4178 | 24 | 111 | 0.12 |
For each domain, the numbers of genes with or without the domain are listed for mapped and unmapped BESs. P values were calculated by using Fisher's exact test.