Table 2.
Markers representing cases where the willow sequence shows best sequence homology to the expected location in the poplar genome (paralog 1), but with a different position in the willow map than the expected, possibly representing translocations of small chromosomal segments between the genomes.
| Marker | Poplar paralog 1* | Poplar paralog 2** | Willow *** | Willow LG |
|---|---|---|---|---|
| XI-5 | XI | NA | XI:14789231- 14789785 | Ib |
| XIII-9_sa | XIII:8154297- 8159215 | No hit | XIII:8156663- 8157295 | Ib |
| XIV_20_sa | XIV:13995907- 14001590 | No hit | XIV:13996955- 13997593 | II |
| XVIII_3_sa | XVIII:2310344- 2313479 | No hit | XVIII:2312570- 2312814 | VI |
| III_23_sa_pI+pIII | III:8892578- 8897817 | No hit | III:8892660- 8893230 | VII |
| II_37_sa_pI | II:20797060- 20804409 | IV:7209830- 7217966 | II:20803016- 20803505 | XVII |
| II-23_sa | II:21561743- 21565690 | No hit | II:21562039- 21562808 | XVII |
* Genomic region in poplar where primers were designed
** The second best BLAST hit with paralog 1
*** Best BLAST hit with the willow sequence
NA = no alignment available since the markers were developed by Hanley et al. (2006)