Table 3. Homology of PAO1 and E. coli candidate-essential genes.
Gene class query | Gene class subject | Strict orthologues |
---|---|---|
PAO1 ORFs (5,570) | E. coli known essential genes | 215 |
PAO1 candidate-nonessential genes (4,892) | E. coli known essential genes | 82 |
PAO1 candidate-essential genes (678) | E. coli known essential genes | 133 |
E. coli known essential genes (232) | PAO1 candidate-essential genes | 135 |
Comparison of predicted translations of PAO1 ORFs to E. coli. Strict orthologues were defined as the top BLAST hit that had a match length of at least 75% of the length of the query sequence.