Table 2.
Isolates of Phoma and related genera used for DNA analyses. The GenBank accession numbers in bold have been obtained from other studies.
| Strain no.1 | Holomorph2 |
GenBank no. |
Original substrate | Locality | |
|---|---|---|---|---|---|
| SSU | LSU | ||||
| CBS 129.79 | Ampelomyces quisqualis | EU754029 | EU754128 | Mildew on Cucumis sativus | Canada |
| CBS 543.70 | Aposphaeria populina | EU754031 | EU754130 | Populus canadensis | Netherlands |
| CBS 246.79; PD 77/655 | Ascochyta caulina T | EU754032 | EU754131 | Atriplex hastata | Germany |
| CBS 544.74 | Ascochyta hordei var. hordei | EU754035 | EU754134 | Triticum aevestum | South Africa |
| CBS 117477 | Ascochyta sp. | GU238202 | GU237926 | Salicornia australis | New Zealand |
| CBS 265.94 | Asteromella tiliae | EU754040 | EU754139 | Tilia platyphilos | Austria |
| CBS 431.74; PD 74/2447 | Boeremia exigua var. exigua B | EU754084 | EU754183 | Solanum tuberosum | Netherlands |
| CBS 341.67; CECT 20055; IMI 331912 | Boeremia foveata B | GU238203 | GU237947 | Solanum tuberosum | U.K. |
| CBS 148.94 | Chaetasbolisia erysiphoides | EU754041 | EU754140 | Unknown | Unknown |
| CBS 216.75; PD 71/1030 | Chaetosphaeronema hispidulum | EU754045 | EU754144 | Anthyllis vulneraria | Germany |
| CBS 589.79 | Coniothyrium concentricum | EU754053 | EU754152 | Yucca sp. | Netherlands |
| CBS 797.95 | Coniothyrium fuckelii | GU238204 | GU237960 | Rubus sp. | Denmark |
| CBS 400.71 | Coniothyrium palmarum | EU754054 | EU754153 | Chamaerops humilis | Italy |
| CBS 122787; PD 03486691 | Coniothyrium sp. | EU754052 | EU754151 | Unknown | Germany |
| CBS 183.55 | Didymella exigua T | EU754056 | EU754155 | Rumex arifolius | France |
| CBS 524.77 | Didymella fabae | EU754034 | EU754133 | Phaseolus vulgaris | Belgium |
| CBS 581.83A | Didymella rabiei | GU238205 | GU237970 | Cicer arietinum | Syria |
| CBS 173.73; ATCC 24428; IMI 164070 | Epicoccum nigrum T | GU238206 | GU237975 | Dactylis glomerata | U.S.A. |
| CBS 298.36 | Leptosphaeria biglobosa | GU238207 | GU237980 | Brassica napus var. napobrassica | Unknown |
| CBS 127.23; MUCL 9930 | Leptosphaeria maculans | EU754090 | EU754189 | Brassica sp. | Netherlands |
| CBS 939.69 | Leptosphaerulina australis | EU754068 | EU754167 | Soil | Netherlands |
| CBS 525.71 | Macroventuria anomochaeta T | GU238208 | GU237984 | Decayed canvas | South Africa |
| CBS 442.83 | Microsphaeropsis olivacea | EU754072 | EU754171 | Taxus baccata | Netherlands |
| CBS 331.37 | Neottiosporina paspali | EU754073 | EU754172 | Paspalum notatum | U.S.A. |
| CBS 122786; PD 99/1064-1 | Paraconiothyrium minitans | EU754075 | EU754174 | Unknown | Unknown |
| CBS 626.68; IMI 108771 | Peyronellaea gardeniae T | GQ387534 | GQ387595 | Gardenia jasminoides | India |
| CBS 528.66; PD 63/590 | Peyronellaea glomerata B | EU754085 | EU754184 | Chrysanthemum sp. | Netherlands |
| CBS 531.66 | Peyronellaea pinodella B | GU238209 | GU238017 | Trifolium pratense | U.S.A. |
| CBS 235.55 | Peyronellaea pinodes | GU238210 | GU238021 | Unknown | Netherlands |
| CBS 588.69 | Peyronellaea zeae-maydis T | EU754093 | EU754192 | Zea mays | U.S.A. |
| CBS 110110 | Phaeosphaeria oryzae | GQ387530 | GQ387591 | Oryza sativa | South Korea |
| CBS 297.74 | Phialophorophoma litoralis | EU754078 | EU754177 | Sea water | Montenegro |
| CBS 285.72 | Phoma apiicola B | GU238211 | GU238040 | Apium graveolens var. rapaceum | Germany |
| CBS 337.65; ATCC 16195; IMI 113693 | Phoma capitulum B | GU238212 | GU238054 | Soil | India |
| CBS 522.66 | Phoma chrysanthemicola T | GQ387521 | GQ387582 | Chrysanthemum morifolium | U.K. |
| CBS 100311 | Phoma complanata | EU754082 | EU754181 | Heracleum sphondylium | Netherlands |
| CBS 345.78; PD 76/1015 | Phoma dimorphospora | GU238213 | GU238069 | Chenopodium quinoa | Peru |
| CBS 527.66 | Phoma eupyrena B | GU238214 | GU238072 | Soil | Germany |
| CBS 161.78 | Phoma fallens B | GU238215 | GU238074 | Olea europaea | New Zealand |
| CBS 170.70; ATCC 22707; CECT 20011; IMI 163514; PD 70/Alk | Phoma fimeti T | GQ387523 | GQ387584 | Apium graveolens | Netherlands |
| CBS 178.93; PD 82/1062 | Phoma flavescens T | GU238216 | GU238075 | Soil | Netherlands |
| CBS 314.80 | Phoma flavigena T | GU238217 | GU238076 | Water | Romania |
| CBS 633.92; ATCC 36786; VKM MF-325 | Phoma fungicola | EU754028 | EU754127 | Microsphaera alphitoides on Quercus sp. | Ukraine |
| CBS 284.70 | Phoma glaucispora B | GU238218 | GU238078 | Nerium oleander | Italy |
| CBS 175.93; PD 92/370 | Phoma haematocycla T | GU238219 | GU238080 | Phormium tenax | New Zealand |
| CBS 615.75; PD 73/665, IMI 199779 | Phoma herbarum B | EU754087 | EU754186 | Rosa multiflora | Netherlands |
| CBS 448.68 | Phoma heteromorphospora B | EU754088 | EU754187 | Chenopodium album | Netherlands |
| CBS 467.76 | Phoma incompta B | GU238220 | GU238087 | Olea europaea | Greece |
| CBS 253.92; PD 70/998 | Phoma lini B | GU238221 | GU238093 | Water | U.S.A. |
| CBS 529.66; PD 66/521 | Phoma macrostoma var. macrostoma B | GU238222 | GU238098 | Malus sylvestris | Netherlands |
| CBS 316.90 | Phoma medicaginis var. medicaginis | GU238223 | GU238103 | Medicago sativa | Czech Republic |
| CBS 509.91; PD 77/920 | Phoma minutispora | GU238224 | GU238108 | Saline soil | India |
| CBS 501.91; PD 83/888 | Phoma multipora B | GU238225 | GU238109 | Unknown | Egypt |
| CBS 376.91; CBS 328.78, PD 77/1177 | Phoma opuntiae B | GU238226 | GU238123 | Opuntia ficus-indica. | Peru |
| CBS 560.81; PD 92/1569; PDDCC 6614 | Phoma paspali T | GU238227 | GU238124 | Paspalum dilatatum | New Zealand |
| CBS 445.81; PDDCC 7049 | Phoma pratorum T | GU238228 | GU238136 | Lolium perenne | New Zealand |
| CBS 111.79; PD 76/437; IMI 386094 | Phoma radicina B | EU754092 | EU754191 | Malus sylvestris | Netherlands |
| CBS 138.96; PD 82/653 | Phoma samarorum B | GQ387517 | GQ387578 | Phlox paniculata | Netherlands |
| CBS 343.85; IMI 386097 | Phoma terricola T | GQ387563 | GQ387624 | Globodera pallida | Netherlands |
| CBS 630.68; PD 68/141 | Phoma valerianae B | GU238229 | GU238150 | Valeriana phu | Netherlands |
| CBS 539.63 | Phoma vasinfecta T | GU238230 | GU238151 | Chrysanthemum sp. | Greece |
| CBS 306.68 | Phoma violicola B | GU238231 | GU238156 | Viola tricolor | Unknown |
| CBS 523.66; PD 66/270 | Pleospora betae B | EU754080 | EU754179 | Beta vulgaris | Netherlands |
| CBS 191.86; IMI 276975 | Pleospora herbarum T | GU238232 | GU238160 | Medicago sativa | India |
| CBS 257.68; IMI 331911 | Pleurophoma cava | EU754100 | EU754199 | Soil | Germany |
| CBS 398.61; IMI 070678 | Pseudorobillarda phragmitis T | EU754104 | EU754203 | Phragmites australis | U.K. |
| CBS 122789; PD 03486800 | Pyrenochaeta acicola | EU754105 | EU754204 | Hordeum vulgare | Unknown |
| CBS 306.65 | Pyrenochaeta lycopersici T | EU754106 | EU754205 | Lycopersicon esculentum | Germany |
| CBS 407.76 | Pyrenochaeta nobilis T | EU754107 | EU754206 | Laurus nobilis | Italy |
| CBS 252.60; ATCC 13735 | Pyrenochaeta romeroi T | EU754108 | EU754209 | Man | Venezuela |
| CBS 524.50 | Sporormiella minima | DQ678003 | DQ678056 | Goat dung | Panama |
| CBS 343.86 | Stagonospora neglecta var. colorata | EU754119 | EU754218 | Phragmites australis | France |
| CBS 101.80; PD 75/909; IMI 386090 | Stagonosporopsis andigena B | GU238233 | GU238169 | Solanum sp. | Peru |
| CBS 133.96; PD 79/127 | Stagonosporopsis cucurbitacearum | GU238234 | GU238181 | Cucurbita sp. | New Zealand |
| CBS 631.68; PD 68/147 | Stagonosporopsis dennisii B | GU238235 | GU238182 | Solidago floribunda | Netherlands |
| CBS 164.31 | Stenocarpella macrospora | EU754121 | EU754220 | Zea mays | Unknown |
1
ATCC: American Type Culture Collection, Virginia, U.S.A.; CBS: Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands; CECT: Colección Española de Cultivos Tipo, Valencia University, Spain; IMI: International Mycological Institute, CABI-Bioscience, Egham, Bakeham Lane, U.K.; MUCL: Mycotheque de l'Universite catholique de Louvain, Louvain-la-Neuve, Belgium; PD: Plant Protection Service, Wageningen, the Netherlands; PDDCC: Plant Diseases Division Culture Collection, Auckland, New Zealand; VKM: All-Russian Collection of Microorganisms, Pushchino, Russia.
2
T: Ex-type strain; B: Reference strain according to Boerema et al. (2004).