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. 2010 Feb 10;11:103. doi: 10.1186/1471-2164-11-103

Table 3.

Different amino acid indices and secondary structural traits of 519 orthologous proteins present in 12 Prochlorococcus strains

Organism Amino acid indices (Mean) Secondary structural traits (%)


Hydrophobicity Aromaticity Isoelectric Point (pI) Instability Index (II) Alpha helix Beta sheet Coil



LL1 -0.11 0.067 6.62 40.61 37.51 13.76 48.73
LL2 -0.11 0.067 6.65 40.71 37.45 13.74 48.81
LL3 -0.16 0.072 7.07 38.88 35.85 14.58 49.57
LL4 -0.16 0.072 7.08 38.81 36.13 14.26 49.61
LL5 -0.18 0.073 7.08 38.09 35.15 14.68 50.17
LL6 -0.18 0.073 7.07 38.10 35.15 14.69 50.16
HL1 -0.20 0.077 7.15 37.03 34.32 15.33 50.35
HL2 -0.20 0.077 7.18 37.19 34.31 15.36 50.33
HL3 -0.20 0.077 7.23 37.33 34.42 15.36 50.22
HL4 -0.20 0.077 7.32 37.36 34.54 15.27 50.19
HL5 -0.20 0.077 7.21 37.02 34.38 15.27 50.35
HL6 -0.20 0.077 7.14 37.15 34.35 15.20 50.45