Table 8.
Genes encoded by the chloroplast and mitochondrial genomes showing attenuated regulation in 35S:ABF3 plants
| Probe Set | 2 h | 24 h | ||||
|---|---|---|---|---|---|---|
| ID | AGI | Annotation | Control | 35S:ABF3 | Control | 35S:ABF3 |
| Electron transport activity | ||||||
| 266045_s_at | At2g07727/AtMg00220 | Cytochrome b (MTCYB) (COB) (CYTB)/apocytochrome b (cob) † | 2.060 | |||
| 244903_at | AtMg00660 | Hypothetical protein (orf149)† | 1.645 | |||
| 244977_at | AtCg00730 | Subunit IV of cytochrome b6/f complex (petD)* | 2.993 | 3.118 | ||
| NADH dehydrogenases | ||||||
| 244943_at | AtMg00070 | NADH dehydrogenase subunit 9 (nad9)† | 1.338 | 1.416 | ||
| 257337_at | AtMg00060 | NADH dehydrogenase subunit 5 (nad5) (Transplice part 3 of 3)† | 1.413 | |||
| 244933_at | AtCg01070 | NADH dehydrogenase ND4L (ndhE)* | 1.733 | |||
| 244994_at | AtCg01010 | Chloroplast encoded NADH dehydrogenase unit (ndhF)* | 3.240 | |||
| 244934_at | AtCg01080 | NADH dehydrogenase ND6 (ndhG)* | 2.465 | |||
| 244991_s_at | AtCg00890/AtCg01250 | NADH dehydrogenase ND2 (ndhB)* | 3.528 | |||
| RNA processing | ||||||
| 244999_at | AtCg00190 | RNA polymerase subunit beta (rpoB)* | 2.792 | |||
| Translation | ||||||
| 245005_at | AtCg00330 | Chloroplast ribosomal protein s14 (rps14)* | 3.796 | 3.644 | ||
| 244970_at | AtCg00660 | Ribosomal protein L20 (rpl20)* | 2.379 | |||
| 244939_at | AtCg00065 | Ribosomal protein s12 (Transplice part 1 of 2) (rps12.1)* | 1.653 | |||
| ATPase subunits | ||||||
| 244995_at | AtCg00150 | Subunit of ATPase complex CF0 (atpI)* | 2.049 | |||
| 266012_s_at | AtMg00410/AtMg01170/At2g07699/At2g07741 | ATPase subunit 6† | 1.924 | |||
| Other | ||||||
| 257319_at | AtMg01100 | Hypothetical protein (orf105a)† | 1.181 | |||
| 244989_s_at | AtCg00860/AtCg01280 | Expressed protein (ycf2)* | 3.493 | |||
| 245008_at | AtCg00360 | Protein required for photosystem I assembly and stability (ycf3)* | 2.371 | |||
| 244990_s_at | AtCg00870/AtCg01270 | Hypothetical protein (ycf15/orf77)* | 3.607 | 2.841 | ||
| 245016_at | AtCg00500 | Acetyl-CoA carboxylase carboxyl transferase subunit beta (accD)* | 1.452 | |||
| 266014_s_at | At2g07722/AtMg00170/AtMg00620 | Hypothetical protein† | 1.987 | |||
Values are log2 fold changes.
* indicates gene is encoded by the chloroplast genome.
† indicates gene is encoded by the mitochondrial genome.