Table 1.
The shRNAs that consistently decreased BT474 cell proliferation in the RNAi screen
| Symbol | Name | Function | % proliferation of control* |
Z-score |
|---|---|---|---|---|
| ERBB2 | V-erb-b2 erythroblastic leukemia viral oncogene homolog 2 | Receptor Tyrosine Kinase | 27.04 | −2.86 |
| MKI67 | Antigen identified by monoclonal antibody Ki-67 | Proliferation | 32.99 | −2.59 |
| NR1D1 | Nuclear receptor subfamily 1, group D, member 1 | Adipogenesis - Fat metabolism | 35.83 | −2.46 |
| PBP | PPAR binding protein PPARBP | Adipogenesis - Fat metabolism | 37.08 | −2.40 |
| MAP2K6 | Mitogen-activated protein kinase kinase 6 | Adipogenesis - Signal Transduction | 37.23 | −2.39 |
| SLPI | Secretory leukocyte protease inhibitor | Proteolysis | 38.65 | −2.33 |
| PFN2 | Profilin 2 | Actin polymerization | 41.06 | −2.22 |
| SPINT1 | Serine protease inhibitor, Kunitz type 1 | Proteolysis | 42.87 | −2.14 |
| LASP1 | LIM and SH3 protein 1 | Actin cytoskeleton organization | 43.27 | −2.12 |
| TPD52 | Tumor protein D52 | Secretion | 46.50 | −1.97 |
| H2AFY | H2A histone family, member Y | Nucleosome assembly | 50.46 | −1.79 |
| SIAT4C | Sialyltransferase 4C | Transferase activity | 53.30 | −1.66 |
| SFRS7 | Splicing factor, arginine/serine-rich 7, 35kDa | Splicing | 53.87 | −1.64 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like | Apoptosis | 54.62 | −1.61 |
| CA9 | Carbonic anhydrase IX | Secretion | 54.01 | −1.61 |
| RPL19 | Ribosomal protein 19 | Ribosome structure | 55.23 | −1.60 |
| FADS2 | Fatty acid desaturase 2 | Fat metabolism | 63.54 | −1.20 |
| STARD3 | StAR-related lipid transfer (START) domain containing 3 | Fat metabolism | 66.88 | −1.00 |
| ERBB3 | V-erb-b2 erythroblastic leukemia viral oncogene homolog 3 | Receptor Tyrosine Kinase | 69.33 | −0.94 |
| GRB7 | Growth factor receptor bound protein 7 | Signal Transduction | 71.41 | −0.84 |
| FASN | Fatty acid synthase | Fat metabolism | 75.40 | −0.66 |
Results shown are statistically significant (P<0.05). Dotted line indicates genes that produced close to or more than 50% decrease in proliferation