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. Author manuscript; available in PMC: 2011 Mar 1.
Published in final edited form as: Cancer Res. 2010 Feb 16;70(5):1783–1792. doi: 10.1158/0008-5472.CAN-09-1550

Table 1.

The shRNAs that consistently decreased BT474 cell proliferation in the RNAi screen

Symbol Name Function % proliferation
of control*
Z-score
ERBB2 V-erb-b2 erythroblastic leukemia viral oncogene homolog 2 Receptor Tyrosine Kinase 27.04 −2.86
MKI67 Antigen identified by monoclonal antibody Ki-67 Proliferation 32.99 −2.59
NR1D1 Nuclear receptor subfamily 1, group D, member 1 Adipogenesis - Fat metabolism 35.83 −2.46
PBP PPAR binding protein PPARBP Adipogenesis - Fat metabolism 37.08 −2.40
MAP2K6 Mitogen-activated protein kinase kinase 6 Adipogenesis - Signal Transduction 37.23 −2.39
SLPI Secretory leukocyte protease inhibitor Proteolysis 38.65 −2.33
PFN2 Profilin 2 Actin polymerization 41.06 −2.22
SPINT1 Serine protease inhibitor, Kunitz type 1 Proteolysis 42.87 −2.14
LASP1 LIM and SH3 protein 1 Actin cytoskeleton organization 43.27 −2.12
TPD52 Tumor protein D52 Secretion 46.50 −1.97
H2AFY H2A histone family, member Y Nucleosome assembly 50.46 −1.79
SIAT4C Sialyltransferase 4C Transferase activity 53.30 −1.66
SFRS7 Splicing factor, arginine/serine-rich 7, 35kDa Splicing 53.87 −1.64
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like Apoptosis 54.62 −1.61
CA9 Carbonic anhydrase IX Secretion 54.01 −1.61
RPL19 Ribosomal protein 19 Ribosome structure 55.23 −1.60

FADS2 Fatty acid desaturase 2 Fat metabolism 63.54 −1.20
STARD3 StAR-related lipid transfer (START) domain containing 3 Fat metabolism 66.88 −1.00
ERBB3 V-erb-b2 erythroblastic leukemia viral oncogene homolog 3 Receptor Tyrosine Kinase 69.33 −0.94
GRB7 Growth factor receptor bound protein 7 Signal Transduction 71.41 −0.84
FASN Fatty acid synthase Fat metabolism 75.40 −0.66
*

Results shown are statistically significant (P<0.05). Dotted line indicates genes that produced close to or more than 50% decrease in proliferation