Table 1.
SeMet1 | native2 | |||
---|---|---|---|---|
Data collection | ||||
Space group | P41212 | P212121 | ||
Cell dimensions (Å) | a = b = 37.91 | a = 33.89, | ||
c = 158.33 | b = 42.96, | |||
c = 154.64 | ||||
SeMet (peak) |
SeMet (remote) |
SeMet (inflection) |
native | |
Wavelength (Å) | 0.9787 | 0.9184 | 0.9792 | 0.9795 |
Resolution (Å) | 50-2.50 (2.54-2.50) |
50-2.50 (2.54-2.50) |
50-2.50 (2.54-2.50) |
50-2.04 (2.08-2.04) |
Total reflections | 66156 | 66714 | 67549 | 111657 |
Unique reflections | 4516 (221) | 4543 (214) | 4604 (233) | 15152 (717) |
Rsym (%) | 4.4 (10.0) | 4.0 (9.8) | 3.8 (9.9) | 4.8 (34.2) |
I/σ(I) | 41.4 (28.0) | 47.0 (28.6) | 54.2 (28.9) | 33.7 (5.7) |
Completeness (%) | 99.5 (100.0) | 99.4 (100.0) | 99.5 (100.0) | 99.9 (100.0) |
Redundancy | 14.6 (15.2) | 14.7 (15.1) | 14.7 (15.4) | 7.4 (7.5) |
Refinement | ||||
Resolution (Å) | 37.55-2.04 | |||
(2.20-2.04) | ||||
Unique reflections | 15092 (2802) | |||
Rwork | 19.9 (20.7) | |||
Rfree | 24.5 (24.7) | |||
Stereochemistry | ||||
Res. in favored region (%) | 92.4 | |||
Res. in allowed region (%) | 7.6 | |||
Number of atoms | ||||
Protein | 1685 | |||
Water | 103 | |||
B factors | ||||
Protein | 40.88 | |||
Water | 48.22 | |||
Rmsd | ||||
Bond lengths (Å) | 0.005 | |||
Bond angles (°) | 0.751 | |||
Residues not modeled | ||||
A | −2, 196–200 | |||
B | −2, 191–200 | |||
C | −2, 196–200 | |||
D | −2, 188–200 |
used for phasing and initial model building
used for structure refinement after molecular replacement with initial model from MAD data.