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. Author manuscript; available in PMC: 2010 Mar 14.
Published in final edited form as: J Math Biol. 2007 Aug 11;56(1-2):215–252. doi: 10.1007/s00285-007-0110-x

Fig. 12.

Fig. 12

Total search time for five geometric searches as a function of discrepancy cutoff. The search labeled GEOM is purely geometric. Other searches are identical to the previous search with the exception of one added constraint as indicated: SEQ sequential constraint; 1 BP one basepair constraint; 2 BP two basepair constraints; 3 BP three basepair constraints. The PDB file 1s72 was searched. Note the logarithmic scale on the vertical axis

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