TABLE 1.
PCR primers/oligonucleotides used in this study
Primer or oligonucleotide | Sequence (5′-3′) | mer |
---|---|---|
Primers | ||
Helicase forward | CATCCATATGGGCTGTCGGGTTACCCCCGG | 30 |
Helicase reverse | CATCGGATCCTCAGAAAAAGTTATTAACGATTG | 33 |
SM GKS forward | GGT GTG CCC GGG TCC GGC GCG TCC CGC TCT ATC ACC | 36 |
SM GKS reverse | GGT GAT AGA GCG GGA CGC GCC GGA CCC GGG CAC ACC | 36 |
SM DE forward | GGG CGC CGG GTT GTC ATT GCT GCG GCT CCA TCC CTC | 36 |
SM DE reverse | GAG GGA TGG AGC CGC AGC AAT GAC AAC CCG GCG CCC | |
RNA oligonucleotides | ||
RNA1 | UUU UUU UUU UUU CGC UGA UGU CGC CUG G | 28 |
RNA2 | CCA GGC GAC AUC AGC G | 16 |
RNA3 | CGC UGA UGU CGC CUG GUU UUU UUU UUU U | 28 |
RNA4 | CCA GGC GAC AUC AGC GAA AAA AAA AAA A | 28 |
Poly(A) | AAA AAA AAA AAA AAA AAA A | 19 |
Poly(G) | GGG GGG GGG GGG GGG GGG G | 19 |
Poly(C) | CCC CCC CCC CCC CCC CCC C | 19 |
Poly(U) | UUU UUU UUU UUU UUU UUU U | 19 |
DNA oligonucleotides | ||
DNA1 | TTT TTT TTT TTT CGC TGA TGT CGC CTG G | 28 |
DNA2 | CCA GGC GAC ATC AGC G | 16 |
DNA3 | CGC TGA TGT CGC CTG GTT TTT TTT TTT T | 28 |
DNA4 | CCA GGC GAC ATC AGC GAA AAA AAA AAA A | 28 |
Poly(A) | AAA AAA AAA AAA AAA AAA A | 19 |
Poly(G) | GGG GGG GGG GGG GGG GGG G | 19 |
Poly(C) | CCC CCC CCC CCC CCC CCC C | 19 |
Poly(T) | TTT TTT TTT TTT TTT TTT T | 19 |