TABLE 1.
hnRNP A18 motif location and score
Shown are the relative positions and scores (in parentheses) of the hnRNP A18 motif in the data set and in 12 examples from the UniGene data base. The position of the motif is relative to the 3′-UTR start site. RPA2, thioredoxin, and ATR have been validated.
| Motif position and score | Accession number | Gene |
|---|---|---|
| Data set | ||
| 156 (18.01), 211 (0.61) | NM_002946 | RPA2 |
| 34 (0.9) | NM_003329 | Thioredoxin |
| 637 (33.73) | HsS3219161 | NADH-ubiquinone oxidoreductase |
| 271 (32.4) | HsS1726680 | eEF1A1 |
| 279 (6.67) | HsS3218967 | Nucleophosmin |
| 445 (0.32) | HsS1726315 | ATPase H+ |
| 45 (4.07) | HsS4001804 | Tubulin α |
| 230 (5.52) | HsS2139327 | HSPC023 |
| 204 (16.44) | HsS1730031 | RPL10 |
| 360 (2.06) | HsS1824519 | RPL13A |
| 54 (19.39), 398 (13.62), 1284 (2.90) | HsS1727678 | RPL15 |
| 92 (8.69) | HsS1727691 | RPL29 |
| UniGene data base | ||
| 150 (4.15) | HsS1726320 | ATR |
| 270 (6) | HsS1729523 | Polo-like kinase |
| 346 (11.85) | HsS5979230 | PIK3R4 |
| 549 (16.39) | HsS1732385 | Fragile X FXR2 |
| 1003 (16) | HsS1726736 | Fanconi anemia |
| 320 (29.85) | NM_138764 | Bax |
| 1126 (7.72) | HsS1726446 | CDK2 |
| 892 (15.1) | HsS2140172 | PAIP2 |
| 1786 (4.86) | HsS2293866 | Hypoxia-inducible factor |
| 41 (3.29) | HsS3618391 | Cyclin B1 |
| 574 (0.5) | HsS3219213 | S100A14 |
| 130 (27.87) | HsS1727530 | 26 S proteasome |