Table 2.
MIPS FunCat analysis of O. affinis ESTs compared with Arabidopsis
| MIPS Functional category | No. ESTs | % |
|---|---|---|
| Metabolism | ||
| 01 metabolism | 196 | 22.3% |
| 02 energy | 53 | 6.0% |
| Information pathways | ||
| 10 cell cycle and DNA processing | 7 | 0.8% |
| 11 transcription | 9 | 1.0% |
| 12 protein synthesis | 60 | 6.8% |
| 14 protein fate (folding, modification, destination) | 88 | 10.0% |
| 16 protein with binding function or cofactor requirement (structural or catalytic) | 7 | 0.8% |
| Transport | ||
| 20 cellular transport, transport facilities and transport routes | 99 | 11.3% |
| Perception and response to stimuli | ||
| 30 cellular communication/signal transduction mechanism | 11 | 1.3% |
| 32 cell rescue, defense and virulence | 74 | 8.4% |
| 34 interaction with the environment | 25 | 2.8% |
| 36 systemic interaction with the environment | 1 | 0.1% |
| Developmental processes | ||
| 40 cell fate | 13 | 1.5% |
| 41 development (systemic) | 16 | 1.8% |
| 42 biogenesis of cellular components | 9 | 1.0% |
| 43 cell type differentiation | 6 | 0.7% |
| 45 tissue differentiation | 1 | 0.1% |
| 47 organ differentiation | 1 | 0.1% |
| Localisation | ||
| 70 subcellular localisation | 3 | 0.3% |
| Proteins with unknown functions | 94 | 10.7% |
| No match* | 107 | 12.2% |
*The cyclotide precursors are within this subcategory.